Difference between revisions of "Part:BBa K2688015"

 
 
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<partinfo>BBa_K2688015 short</partinfo>
  
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LEE (locus of enterocyte effacement) is a genomic island that encodes a secretion system in enteropathogenic E. coli. This BioBrick is a small part of the island containing the promoter region of the 5th operon.
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Compared to LEE5_native (BBa_K2688010), this variant has 2 point mutation of indeterminate significance. This does not preclude heterogeneous expression. This variant also has a 2bp deletion (used in the composite part BBa_K2688016, so that the tir fragment and the GFP are in the same frame)
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This region has been shown to be recognized by two nucleoid-associated proteins, H-NS and Ler (‘LEE encoded regulator’). The regulation by these proteins can generate some heterogeneity of transgene expression within E. coli populations as recently shown by Leh and collaborators (Leh et al, mBIO, 2017).
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<span class='h3bb'>Sequence and Features</span>
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<partinfo>BBa_K2688015 SequenceAndFeatures</partinfo>

Latest revision as of 15:33, 23 September 2018

LEE5_variant-1_inframe


LEE (locus of enterocyte effacement) is a genomic island that encodes a secretion system in enteropathogenic E. coli. This BioBrick is a small part of the island containing the promoter region of the 5th operon.


Compared to LEE5_native (BBa_K2688010), this variant has 2 point mutation of indeterminate significance. This does not preclude heterogeneous expression. This variant also has a 2bp deletion (used in the composite part BBa_K2688016, so that the tir fragment and the GFP are in the same frame)


This region has been shown to be recognized by two nucleoid-associated proteins, H-NS and Ler (‘LEE encoded regulator’). The regulation by these proteins can generate some heterogeneity of transgene expression within E. coli populations as recently shown by Leh and collaborators (Leh et al, mBIO, 2017).

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 50