Difference between revisions of "Part:BBa K2292003"
Max25244021 (Talk | contribs) |
|||
Line 8: | Line 8: | ||
https://static.igem.org/mediawiki/parts/a/ac/TCSTS~23~.jpg | https://static.igem.org/mediawiki/parts/a/ac/TCSTS~23~.jpg | ||
+ | |||
+ | Figure 1 Mechanism of CSP detection | ||
+ | |||
+ | https://static.igem.org/mediawiki/parts/2/24/Agarose_gel_electrophoresis_of_pSBBS1C.jpg | ||
+ | |||
+ | Figure 2 Agarose gel electrophoresis of PCR product (pSBBS1C) | ||
+ | |||
+ | https://static.igem.org/mediawiki/parts/b/b4/Agarose_gel_electrophoresis_of_pSBBS4S.jpg | ||
+ | |||
+ | Figure 3 Agarose gel electrophoresis of PCR product (pSBBS4S) | ||
+ | |||
+ | For the measurement of the fluorescent plate reader (excitation: 485 nm, emission: 520 nm), we found out that the best amount of bacteria for measuring, the CSP conc. is at the value of OD600 = 0.2 after a series of experiment. | ||
+ | |||
+ | https://static.igem.org/mediawiki/parts/thumb/e/e2/Fluorescence-CSP_concentration-Time.jpg/664px-Fluorescence-CSP_concentration-Time.jpg | ||
+ | |||
+ | Figure 4 Three-dimension diagram (Fluorescence-CSP concentration-Time) | ||
+ | |||
+ | The intensity of fluorescence slowly drops after a sharp rise in a small amount of time, hence we can tell that the reaction starts right away as soon as CSP is added. | ||
<!-- Add more about the biology of this part here | <!-- Add more about the biology of this part here |
Revision as of 01:16, 2 November 2017
comDE two components signal transduction system
This is a composite used for producing comD, comE, two essential protein for the CSP two components signal transduction system. Originated from Streptococcus mutans. ComD is a kinase and membrane-associated receptor. After comD binded to the quorum sensing molecule CSP, the comD-CSP complex will phosphorylate comE. Then, the phosphorylated comE can turn on the transcription of downstream gene. FLAG-TAG is added after comE and c-Myc is added after comD
Figure 1 Mechanism of CSP detection
Figure 2 Agarose gel electrophoresis of PCR product (pSBBS1C)
Figure 3 Agarose gel electrophoresis of PCR product (pSBBS4S)
For the measurement of the fluorescent plate reader (excitation: 485 nm, emission: 520 nm), we found out that the best amount of bacteria for measuring, the CSP conc. is at the value of OD600 = 0.2 after a series of experiment.
Figure 4 Three-dimension diagram (Fluorescence-CSP concentration-Time)
The intensity of fluorescence slowly drops after a sharp rise in a small amount of time, hence we can tell that the reaction starts right away as soon as CSP is added.
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21INCOMPATIBLE WITH RFC[21]Illegal BglII site found at 268
Illegal XhoI site found at 123
Illegal XhoI site found at 153 - 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]