Difference between revisions of "Part:BBa K2292003"

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https://static.igem.org/mediawiki/parts/a/ac/TCSTS~23~.jpg
 
https://static.igem.org/mediawiki/parts/a/ac/TCSTS~23~.jpg
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Figure 1 Mechanism of CSP detection
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https://static.igem.org/mediawiki/parts/2/24/Agarose_gel_electrophoresis_of_pSBBS1C.jpg
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Figure 2 Agarose gel electrophoresis of PCR product (pSBBS1C)
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https://static.igem.org/mediawiki/parts/b/b4/Agarose_gel_electrophoresis_of_pSBBS4S.jpg
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Figure 3 Agarose gel electrophoresis of PCR product (pSBBS4S)
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For the measurement of the fluorescent plate reader (excitation: 485 nm, emission: 520 nm), we found out that the best amount of bacteria for measuring, the CSP conc. is at the value of OD600 = 0.2 after a series of experiment.
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https://static.igem.org/mediawiki/parts/thumb/e/e2/Fluorescence-CSP_concentration-Time.jpg/664px-Fluorescence-CSP_concentration-Time.jpg
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Figure 4 Three-dimension diagram (Fluorescence-CSP concentration-Time)
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The intensity of fluorescence slowly drops after a sharp rise in a small amount of time, hence we can tell that the reaction starts right away as soon as CSP is added.
  
 
<!-- Add more about the biology of this part here
 
<!-- Add more about the biology of this part here

Revision as of 01:16, 2 November 2017


comDE two components signal transduction system

This is a composite used for producing comD, comE, two essential protein for the CSP two components signal transduction system. Originated from Streptococcus mutans. ComD is a kinase and membrane-associated receptor. After comD binded to the quorum sensing molecule CSP, the comD-CSP complex will phosphorylate comE. Then, the phosphorylated comE can turn on the transcription of downstream gene. FLAG-TAG is added after comE and c-Myc is added after comD

TCSTS~23~.jpg

Figure 1 Mechanism of CSP detection

Agarose_gel_electrophoresis_of_pSBBS1C.jpg

Figure 2 Agarose gel electrophoresis of PCR product (pSBBS1C)

Agarose_gel_electrophoresis_of_pSBBS4S.jpg

Figure 3 Agarose gel electrophoresis of PCR product (pSBBS4S)

For the measurement of the fluorescent plate reader (excitation: 485 nm, emission: 520 nm), we found out that the best amount of bacteria for measuring, the CSP conc. is at the value of OD600 = 0.2 after a series of experiment.

664px-Fluorescence-CSP_concentration-Time.jpg

Figure 4 Three-dimension diagram (Fluorescence-CSP concentration-Time)

The intensity of fluorescence slowly drops after a sharp rise in a small amount of time, hence we can tell that the reaction starts right away as soon as CSP is added.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 268
    Illegal XhoI site found at 123
    Illegal XhoI site found at 153
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]