Difference between revisions of "Part:BBa K2516001"
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This promoter consists of 5 main parts: | This promoter consists of 5 main parts: | ||
− | 1) HSP70A promoter (1-263) is the first upstream region of Heat Shock Protein 70A from <i>C. reinhardtii</i>. This sequence spacing-dependent and acts as an inhibitor of transcriptional silencing in <i>C. reinhardtii</i>. [1] | + | 1) <u>HSP70A promoter</u> (1-263) is the first upstream region of Heat Shock Protein 70A from <i>C. reinhardtii</i>. This sequence spacing-dependent and acts as an inhibitor of transcriptional silencing in <i>C. reinhardtii</i>. [1] |
− | 2) [Improvement] High-efficiency separator sequence between two promoters (264-272) that provides the best spacing between two promoters, resulting in an increase of transformation rate by 2.6 times relative to original separating sequence. [1] | + | 2) <b>[Improvement]</b> <u>High-efficiency separator sequence between two promoters</u> (264-272) that provides the best spacing between two promoters, resulting in an increase of transformation rate by 2.6 times relative to original separating sequence. [1] |
− | 3) RBCS2 promoter (273-454) is a promoter region of nuclear ribulose bisphosphate carboxylase/oxygenase small subunit gene from <i>C. reinhardtii</i>. It is the most widely utilized promoter for robust transgene expression in <i>C. reinhardtii</i>. [1] | + | 3) <u>RBCS2 promoter</u> (273-454) is a promoter region of nuclear ribulose bisphosphate carboxylase/oxygenase small subunit gene from <i>C. reinhardtii</i>. It is the most widely utilized promoter for robust transgene expression in <i>C. reinhardtii</i>. [1] |
+ | |||
+ | 4) <u>5' untranslated region of the nuclear RBCS2 gene</u> (455-489) from <i>C. reinhardtii</i> acts as an enhancer. | ||
+ | |||
+ | 5) <b>[Improvement]</b> <u>The first intron of RBCS2 gene</u> (490-634), it acts as an enhancer and increases expression by 5-6 times [2]. | ||
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Reference List: | Reference List: | ||
Revision as of 21:28, 1 November 2017
pHSP70/pRBCS2 combined promoter for C. reinhardtii
Improved part from 2016
This part is an improved version of USP_UNIFESP-Brazil 2016 iGEM team. Link: https://parts.igem.org/Part:BBa_K2136013
The combined constitutive endogenous promoter used for foreign gene expression in C. reinhardtii.
This promoter consists of 5 main parts:
1) HSP70A promoter (1-263) is the first upstream region of Heat Shock Protein 70A from C. reinhardtii. This sequence spacing-dependent and acts as an inhibitor of transcriptional silencing in C. reinhardtii. [1]
2) [Improvement] High-efficiency separator sequence between two promoters (264-272) that provides the best spacing between two promoters, resulting in an increase of transformation rate by 2.6 times relative to original separating sequence. [1]
3) RBCS2 promoter (273-454) is a promoter region of nuclear ribulose bisphosphate carboxylase/oxygenase small subunit gene from C. reinhardtii. It is the most widely utilized promoter for robust transgene expression in C. reinhardtii. [1]
4) 5' untranslated region of the nuclear RBCS2 gene (455-489) from C. reinhardtii acts as an enhancer.
5) [Improvement] The first intron of RBCS2 gene (490-634), it acts as an enhancer and increases expression by 5-6 times [2].
Reference List:
1. Schroda, M., Beck, C. F., & Vallon, O. (2002). Sequence elements within an HSP70 promoter counteract transcriptional transgene silencing in Chlamydomonas. The Plant Journal, 31(4), 445-455. 2. Lumbreras, V., Stevens, D. R., & Purton, S. (1998). Efficient foreign gene expression in Chlamydomonas reinhardtii mediated by an endogenous intron. The Plant Journal, 14(4), 441-447.
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12INCOMPATIBLE WITH RFC[12]Illegal NheI site found at 264
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]