Difference between revisions of "Part:BBa K2273003"
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The most important promoter regulated by ComA and involved in competence development is the promoter of the <i>srfA</i> operon (P<sub><i>srfA</i></sub>, <a href="https://parts.igem.org/Part:BBa_K2273000">BBa_K2273000</a>). This operon contains not only genes for the production of the antibiotic surfactin <b>(e)</b> but also for ComS <b>(f)</b>, another small peptide that prevents the degradation of the autoregulated transcription factor ComK <b>(g)</b>. ComK activates expression of more than 100 genes, including <i>comG</i>, that is part of the transformation machinery <b>(h)</b> <a target="_blank" href="https://www.ncbi.nlm.nih.gov/pubmed/16091051">(Comella <i>et al.</i>,</a><a target="_blank" href="https://www.ncbi.nlm.nih.gov/pubmed/14762007">Susanna <i>et al.</i>)</a>. Consequently, <i>B. subtilis</i> can take up DNA from the environment either as direct nutrient source or incorporate the DNA via homologues recombination into its own genome. | The most important promoter regulated by ComA and involved in competence development is the promoter of the <i>srfA</i> operon (P<sub><i>srfA</i></sub>, <a href="https://parts.igem.org/Part:BBa_K2273000">BBa_K2273000</a>). This operon contains not only genes for the production of the antibiotic surfactin <b>(e)</b> but also for ComS <b>(f)</b>, another small peptide that prevents the degradation of the autoregulated transcription factor ComK <b>(g)</b>. ComK activates expression of more than 100 genes, including <i>comG</i>, that is part of the transformation machinery <b>(h)</b> <a target="_blank" href="https://www.ncbi.nlm.nih.gov/pubmed/16091051">(Comella <i>et al.</i>,</a><a target="_blank" href="https://www.ncbi.nlm.nih.gov/pubmed/14762007">Susanna <i>et al.</i>)</a>. Consequently, <i>B. subtilis</i> can take up DNA from the environment either as direct nutrient source or incorporate the DNA via homologues recombination into its own genome. | ||
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+ | <p> | ||
<br>By using an inducible copy of <i>comX</i> we evaluated the influence of the ComX pheromon on various promoter that are listed in the table below. | <br>By using an inducible copy of <i>comX</i> we evaluated the influence of the ComX pheromon on various promoter that are listed in the table below. | ||
<table> | <table> | ||
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c) compensation of comX-deficiency (Figure 2). | c) compensation of comX-deficiency (Figure 2). | ||
</p> | </p> | ||
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<figure style="padding-right:15%; padding-left:15%;"> | <figure style="padding-right:15%; padding-left:15%;"> |
Revision as of 20:15, 31 October 2017
ComX pheromone for competence development in Bacillus subtilis
Usage and Biology
By using an inducible copy of comX we evaluated the influence of the ComX pheromon on various promoter that are listed in the table below.
PsrfA | BBa_K2273000 |
PrapA | BBa_K2273001 |
PrapF | BBa_K2273002 |
PcomG | BBa_K2273012 |
PcomK mut | BBa_K2273013 |
ss='h3bb'></p> Especially for PsrfA we could show
a) ComX-dependence,
b) an increase of promoter activity by overproducing ComX and
c) compensation of comX-deficiency (Figure 2). </p>
<figure style="padding-right:15%; padding-left:15%;">
<img src="" width="100%" >
<figcaption>Figure 9: Growth (A) and promoter activity of various promoters (B) in dependence of xylose-induced ComX-production. Wild type (WT, pink and light blue) and comX-knockout strains (ΔcomX, black and dark blue) contain a promoter-luxABCDE fusion as well as an inducible copy of comX. After 1 hour of incubation (dashed line) the cultures were induced with 1% xylose (light blue and black) or with distilled water (dH2O, pink and dark blue).
</figcation></figure>
The part was created and used by <a target="_blank" href="http://2017.igem.org/Team:TU_Dresden/Project/Communication">TU_Dresden 2017</a>. All assays have been conducted with B. subtilis W168 carrying the promoter fused to the comX upstream a xylose-inducible promoter (PxylA). Sequence and Features</span>
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]