Difference between revisions of "Part:BBa K2322003"

 
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<partinfo>BBa_K2322003 short</partinfo>
 
<partinfo>BBa_K2322003 short</partinfo>
  
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https://static.igem.org/mediawiki/parts/9/98/Part%E7%94%A8No.5.png
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The circuit contain AOX1 promoter, the secretion signal, RBS, ScTPS1 and terminator.
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This circuit is used to test the expression of ScTPS1. If the circuit work, the ScTPS1 will express extracellular in GS115.
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Name: BBa_K2322003
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AOX1 promoter:
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Sequence of the primer:
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ATGATTTCTGGAATTCGCGGCCGCTTCTAGAGATCTAACATCCAAAGACGAAAGGT
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Function: AOX1 is a strong promoter in the pichia pastoris. It is highly effective. It can be restricted by glucose, glycerinum, ethyl alcohol. It can be induced by the methanol. In our experiment, our circuit is in an environment containing methanol. In this circuit, it is used to control and increase the expression of ScTPS1, our targeted gene. 
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Secretion signal:
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Secretion signal is to prompt a cell to translocate the protein, in this case, the protein that induced by ScTPS1 can express extracellular. And in this circuit, after collecting the protein that express outside, we can determine the ScTPS1’s function as a qualitatively way.
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RBS (Ribosome Binding Site):
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A ribosome binding site is a sequence of mRNA. It is used to make sure the ribosome is on the correct position of the mRNA at the beginning of the translation.
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Sequence: TCACACAGGAAACA
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<!-- Add more about the biology of this part here
 
<!-- Add more about the biology of this part here

Revision as of 13:21, 31 October 2017


-AOX1 promoter-S-RBS-ScTPS1-

Part%E7%94%A8No.5.png

The circuit contain AOX1 promoter, the secretion signal, RBS, ScTPS1 and terminator. This circuit is used to test the expression of ScTPS1. If the circuit work, the ScTPS1 will express extracellular in GS115.

Name: BBa_K2322003

AOX1 promoter: Sequence of the primer: ATGATTTCTGGAATTCGCGGCCGCTTCTAGAGATCTAACATCCAAAGACGAAAGGT

Function: AOX1 is a strong promoter in the pichia pastoris. It is highly effective. It can be restricted by glucose, glycerinum, ethyl alcohol. It can be induced by the methanol. In our experiment, our circuit is in an environment containing methanol. In this circuit, it is used to control and increase the expression of ScTPS1, our targeted gene.

Secretion signal:

Secretion signal is to prompt a cell to translocate the protein, in this case, the protein that induced by ScTPS1 can express extracellular. And in this circuit, after collecting the protein that express outside, we can determine the ScTPS1’s function as a qualitatively way.

RBS (Ribosome Binding Site): A ribosome binding site is a sequence of mRNA. It is used to make sure the ribosome is on the correct position of the mRNA at the beginning of the translation. Sequence: TCACACAGGAAACA


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 1
    Illegal BamHI site found at 938
    Illegal XhoI site found at 1192
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]