Difference between revisions of "Part:BBa K2505001:Design"

 
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===Design Notes===
 
===Design Notes===
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None.
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<span style="margin-left: 25px;">This part produces AHK4, a receptor of iP(isopentenyl adenine: kind of cytokinin). This part was introduced to <i>E.coli</i> KMI002 strain and sensed iP synthesized by human cell. The gene(<i>ahk4</i>) is derived from <i>A.thaliana</i> and optimized for <i>E.coli</i> codon in reference to the codon usage. The AHK4 protein is transmembrane protein and toxic for <i>E.coli</i> cell. Thus, We regulated expression of AHK4 by P<sub>BAD/araC</sub>: L-arabinose operon(tight transcriptionaly regulation system)
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Revision as of 08:23, 29 October 2017


pBad/araC-rbs-ahk4


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 1205
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 1294
    Illegal BamHI site found at 1144
    Illegal BamHI site found at 2375
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 979
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal SapI site found at 961
    Illegal SapI site found at 1542
    Illegal SapI.rc site found at 3177


Design Notes

This part produces AHK4, a receptor of iP(isopentenyl adenine: kind of cytokinin). This part was introduced to E.coli KMI002 strain and sensed iP synthesized by human cell. The gene(ahk4) is derived from A.thaliana and optimized for E.coli codon in reference to the codon usage. The AHK4 protein is transmembrane protein and toxic for E.coli cell. Thus, We regulated expression of AHK4 by PBAD/araC: L-arabinose operon(tight transcriptionaly regulation system)


Source

This subparts were synthesized by IDT or used from iGEM Desrtibutuion kits.

===References===