Difference between revisions of "Part:BBa K2206006:Design"

 
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===Design Notes===
 
===Design Notes===
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We ensured that there are no stop codons between the start codon and the protein coding sequence.  
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No terminators are needed as the pSB1C3 plasmid contains terminators.
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+
A non-leaky inducible promoter is needed to amplify the constructs in E.coli as quite a high concentration of the transcripts is toxic to E.coli.
  
  

Revision as of 22:57, 2 October 2017


Toehold switch for hsa-miR-15b-5p with GFPmut3b and inducible promoter


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 1144
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 979
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 1938
    Illegal SapI site found at 961


Design Notes

No terminators are needed as the pSB1C3 plasmid contains terminators. A non-leaky inducible promoter is needed to amplify the constructs in E.coli as quite a high concentration of the transcripts is toxic to E.coli.


Source

This part is a synthetic toehold switch that was designed in silico and synthesised by IDT.

References