Difference between revisions of "Part:BBa K1976051"
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| − | <h1>Colicin E2 DNase trypsin fragment with B0034</h1> | + | <h1>Colicin E2 DNase trypsin fragment with B0034 RBS</h1> |
The DNase trypsin fragment (part <a href="https://parts.igem.org/Part:BBa_K197604">BBa_K1976049</a>) can be obtained by trypsin digestion of colicin E2. In this part the gene is fusioned to the strong ribosomal binding site B0034. | The DNase trypsin fragment (part <a href="https://parts.igem.org/Part:BBa_K197604">BBa_K1976049</a>) can be obtained by trypsin digestion of colicin E2. In this part the gene is fusioned to the strong ribosomal binding site B0034. | ||
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===<h2>Characteristics</h2>=== | ===<h2>Characteristics</h2>=== | ||
<h2>Sequence and Features</h2> | <h2>Sequence and Features</h2> | ||
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<partinfo>BBa_K1976051 SequenceAndFeatures</partinfo> | <partinfo>BBa_K1976051 SequenceAndFeatures</partinfo> | ||
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| + | <b>References</b> | ||
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| + | [1] Cascales et al, Colicin Biology, Microbiology and Molecular Biology Reviews, vol. 71, pp. 158-229, 2007<br> | ||
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Revision as of 03:16, 28 October 2016
Colicin E2 DNase trypsin fragment with B0034 RBS
The DNase trypsin fragment (part BBa_K1976049) can be obtained by trypsin digestion of colicin E2. In this part the gene is fusioned to the strong ribosomal binding site B0034.Usage
This part can be used for assembly of generators. In combination with the immunity protein Im2 (part BBa_K1976026) it serves as a safety mechanism (see part BBa_K1976053).
Characteristics
The DNase trypsin fragment of colicin E2 consists of 137 residues what conforms to about one third to colicin. We used only one of the three domains of colicin since the metabolic burdon would be significant smaller. This fragment differs to the part 50 in 5 additional amino acids since a trypsin digestion described in the literature leaded to this fragment. So we wanted to check out any difference in the activities between the DNase fragment with and without theese additional amino acids. The activity tests showed that the so called miniColicin has functional DNase activity.
Characteristics
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal AgeI site found at 64
- 1000COMPATIBLE WITH RFC[1000]
[1] Cascales et al, Colicin Biology, Microbiology and Molecular Biology Reviews, vol. 71, pp. 158-229, 2007