Difference between revisions of "Part:BBa K1913016"

 
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434- and lambda cI balance RFP reporter  
 
434- and lambda cI balance RFP reporter  
  
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===Usage and Biology===
 
===Usage and Biology===
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<p>We have combined BBa_K1913016 and BBa_K1913007 into BBa_K1913006, inserted an RBS library (see design notes) upstream of the 434 cI gene and transformed it to DH5alpha. DH5α cells transformed with the BBa_K1913006 plasmid yielded clones with varying intensities of red coloring on agar (without both L-Arabinose and D-Glucose) plates (Figure 1). The variation in the red intensity is seen very clearly between the top three circled colonies in Figure 12.This diversity is an indication that BBa_K1913016 works as intended: variation in the 434 cI RBS should cause different ratios between λ and 434 cI protein levels, leading to differences in mRFP expression. </p>
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https://static.igem.org/mediawiki/parts/0/0e/T--Wageningen_UR--imagenamehere.jpg
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<p>Figure 11. Close-up picture of culture plate with colonies containing the subpopulation two-operon plasmid (including the RBS library). The blue circled and (faintly) red circled colonies were selected to be used in separate plate reader experiments.</p>
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Revision as of 11:45, 19 October 2016


434- and lambda cI balance RFP reporter

434- and lambda cI balance RFP reporter


Usage and Biology

We have combined BBa_K1913016 and BBa_K1913007 into BBa_K1913006, inserted an RBS library (see design notes) upstream of the 434 cI gene and transformed it to DH5alpha. DH5α cells transformed with the BBa_K1913006 plasmid yielded clones with varying intensities of red coloring on agar (without both L-Arabinose and D-Glucose) plates (Figure 1). The variation in the red intensity is seen very clearly between the top three circled colonies in Figure 12.This diversity is an indication that BBa_K1913016 works as intended: variation in the 434 cI RBS should cause different ratios between λ and 434 cI protein levels, leading to differences in mRFP expression.

T--Wageningen_UR--imagenamehere.jpg

Figure 11. Close-up picture of culture plate with colonies containing the subpopulation two-operon plasmid (including the RBS library). The blue circled and (faintly) red circled colonies were selected to be used in separate plate reader experiments.



Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 1470
    Illegal AgeI site found at 1582
  • 1000
    COMPATIBLE WITH RFC[1000]