This generator overexpress Humicola insolens cutinase (HIC) by using a [https://parts.igem.org/Part:BBa_I719005 T7 promoter system]. For more information about the Humicola insolens cutinase (HIC) have a look on the [https://parts.igem.org/Part:BBa_K1602018 coding sequence].
This generator overexpress Humicola insolens cutinase (HIC) by using a [https://parts.igem.org/Part:BBa_I719005 T7 promoter system]. For more information about the Humicola insolens cutinase (HIC) have a look on the [https://parts.igem.org/Part:BBa_K1602018 coding sequence].
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<h2>Abstract</h2>
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Since our bioreactor concept is suitable for more pathways than xylan degradation, we searched for another approach to show the functionality of our concept.<br>
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3D printing leads to additional plastic creation and eventually to more garbage. The photopolymer synthesized in the course of this project numbers among the group of polyesters - polymeric structures containing ester functional groups. Since a few decades some of these compounds had become widely manufactured synthetics. Due to rare biodegradable capacity, pollution with plastic garbage became a serious problem.
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Reflecting this problem led us to the idea of inverting the intended polyester production by implementing polyester degradation in the designed <i>in vitro</i> bioreactor.
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<h2>Goal</h2>
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It is not only our aim to create an efficient, photocurable polymer but also in the long run preserve ecologic values and degrade the resulting polymers eco-friendly. Therefore we insisted on improving a part from last year, the HiC - human insulens cutinase. This protein is capable of cleaving ester bonds and thereby capable of degrading common polymers. The HiC serin hydrolase has a catalytic centrum formed as a catalytic triade. In comparison to other
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Revision as of 16:14, 24 September 2015
Inducible generator of Humicola insolens cutinase
This generator overexpress Humicola insolens cutinase (HIC) by using a T7 promoter system. For more information about the Humicola insolens cutinase (HIC) have a look on the coding sequence.
Results
Final volume of the plate was 200µl containig:
142µl Buffer (Na2HPO4 pH 7.0)
bromothymol blue 10% (v/v)
TES protein fraction HiC (ranging from 5µl to 30µl; concentration unknown)
8µl prepolymer (dissolved in Triton100 and DMSO 1:50)
TES protein fraction (from BL21 cells ranging from 5µl to 30µl; as a control)
The negative control was done by just adding buffer to the well.
The 96 well microplate was loaded as depicted in the picture below:
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Figure 1 96-well microplate layout
The assay was run in a in a TECAN® Infinite 200 PRO multi plate reader for 100 kinetic cycles, each 5 mins long and with 25 photo pulses per cycle. The reader was heated to the appropriate temperature of 42° celsius. Absorbance was measured at the absorption maximum of BTB which in this case is 620nm.
Pictures of the multi plate
Figure 1 The plate at the beginning of the measurement.
Figure 2 The plate after the measurement.
Figure 3 The plate after 24 additional hours at room temperature.
The HiC is capable of degrading the prepolymer and in this process releases acidic compounds which acidify the buffer solution in the wells. This made visible via the indicator BTB. The temperature optimum was characterized as 45%deg;C. We decided on such long kinetic cycles because the metabolic rate was proven very low.
Figure 4 This graph show the activity of the HiC at 25°C.
Figure 5 Heat activity test with rising temperature from 45°C to 70°C..
