Difference between revisions of "Part Type:Protein Coding Regions"
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* Enzymes | * Enzymes | ||
[https://parts.igem.org/cgi/partsdb/pgroup.cgi?pgroup=Enzyme https://static.igem.org/mediawiki/parts/7/7b/Part_icon_cds.png] [https://parts.igem.org/cgi/partsdb/pgroup.cgi?pgroup=Enzyme Enzyme][https://parts.igem.org/wiki/index.php/Help:Protein_coding https://static.igem.org/mediawiki/parts/e/e9/Help_icon_10px.png] | [https://parts.igem.org/cgi/partsdb/pgroup.cgi?pgroup=Enzyme https://static.igem.org/mediawiki/parts/7/7b/Part_icon_cds.png] [https://parts.igem.org/cgi/partsdb/pgroup.cgi?pgroup=Enzyme Enzyme][https://parts.igem.org/wiki/index.php/Help:Protein_coding https://static.igem.org/mediawiki/parts/e/e9/Help_icon_10px.png] | ||
| − | possible enzyme icon? [[Image:Part icon enzyme1.png]]...basic idea is a box binding two substrates in it... | + | possible enzyme icon? [[Image:Part icon enzyme1.png]]...basic idea is a box binding two substrates in it...(--mel) |
* I like the little shapes in the box, but it would be better to omit the top of the box (make it a trough instead). That's more realistic for most enzymes. Also, could the box sides be extended to convey the notion that the enzyme is usually much bigger than the substrate(s)? [SCM - 3/12/07] | * I like the little shapes in the box, but it would be better to omit the top of the box (make it a trough instead). That's more realistic for most enzymes. Also, could the box sides be extended to convey the notion that the enzyme is usually much bigger than the substrate(s)? [SCM - 3/12/07] | ||
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* Metabolism | * Metabolism | ||
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| + | *would metabolism really represent the action of an enzyme? I don't think I've ever seen the curved arrows before...are those the ones indicating electron-arrow pushing? That idea with the trough sounds good to me. --[[User:Smelissali|Smelissali]] 15:29, 26 March 2007 (EDT) | ||
Revision as of 19:29, 26 March 2007
All Protein Coding Regions
The old table of all the Protein Coding Regions
Enzymes
Enymes catalyze biochemical reactions.
- Enzymes
Enzyme
possible enzyme icon? 
...basic idea is a box binding two substrates in it...(--mel)
- I like the little shapes in the box, but it would be better to omit the top of the box (make it a trough instead). That's more realistic for most enzymes. Also, could the box sides be extended to convey the notion that the enzyme is usually much bigger than the substrate(s)? [SCM - 3/12/07]
- An alternative suggestion from Reshma: Make little curved arrows and put several of them in a row, all pointing in the same direction (reminiscent of a metabolic pathway). [SCM - 3/14/07]
- Metabolism
- would metabolism really represent the action of an enzyme? I don't think I've ever seen the curved arrows before...are those the ones indicating electron-arrow pushing? That idea with the trough sounds good to me. --Smelissali 15:29, 26 March 2007 (EDT)
Repressors and Activators
- Possible repressor protein icon?
, 
? - Repressor icon should be an inverted T, as in circuit diagrams. Activator icon should be an arrow pointing up. [SCM - 3/12/07]
- Reshma and Mack favor a slightly more elaborate symbol for each of these, along the lines of the circuit-component interaction lines. each would have a short vertical bar, a horizontal bar starting at the top end of that, then from the end of the horizontal bar a second, equal-sized vertical bar going downward. For activation the tip of the second bar would be an arrowhead, and for repression it would be another horizontal bar. [SCM - 3/14/07]