Difference between revisions of "Part:BBa K1722011"

Revision as of 12:19, 7 September 2015

shTERT+tRNA(CUA) Composite

hTERT+tRNA, the device that we constructed this year, will perform its function with two other devices hUPll+AckRS(BBa_K1722007) and SV40+Rlu(BBa_K1722012).

hTERT, which is short for human telomerase reverse transcriptase, is a cancer-cell specific promoter. It can be activated inside cancer cells with no effect on normal cells. By mutating four base pairs of hTERT sequence, we achieved an improved promoter with higher promote efficiency named super hTERT(shTERT). As an important component of human telomerase, hTERT express only in tumor cells and other immortal cells which are telomerase positive. Only in tumor cells that can express TERT can the promoter being activated to realize targeted expression of effector gene.

We constructed another gene downstream of shTERT called tRNA, which encodes an unusual transfer RNA(tRNA) with a CUA anticodon. The tRNA(CUA) that is produced can be charged with Acetyllysine(Ack) with the help of Acetyllysine tRNA synthetase(AckRS). It is also the first step in translating UAG amber codon.

In our project, when shTERT is activated inside bladder cancer cell, downstream tRNA sequence can be expressed to produce tRNA with CUA as its anticodon. Together with AckRS, tRNA can carry Ack and pair with the amber UAG stop codon of the mRNA chain to completely produce the interest protein.Our unnatural amino acid orthogonal system consists of three devices(plasmids).

(1)hUPll+AckRS(BBa_K1722007): hUPll is a bladder-cell specific promoter. when it's activated, AckRS, a tRNA synthetase, will be produced.

(2)hTERT+tRNA(BBa_K1722010)/ shTERT+tRNA(BBa_K1722011): hTERT and shTERT are cancer-cell specific promoters. tRNA can be expressed out when the promoter is activated.

(3)SV40+Rluc(BBa_K1722012): SV40 is a widely used strong promoter. Rluc is a reporter that can produce RLUC which is a kind of luciferase.

There is an amber stop codon UAG in the sequence of Rluc. The tRNA that is produced from the second plasmid has CUA as its anticodon, which can pair with the stop codon of the mRNA chain of Rluc. AckRS can achieve the attachment of Ack, the unnatural amino acid, and the tRNA. In this way, when all the three promoters are activated inside bladder cancer cell, Ack can be charged to the specific tRNA and then the anticodon of tRNA can pair with the stop codon on the mRNA chain of Rluc. In natural condition, this Rluc gene cannot be fully expressed because of the amber stop codon. However, with our orthogonal system, it can be produced and detected.

The three plasmids that we've constructed were inserted into three lines of cells(HFC, Hela and 5637). HFC is short for Human Fiber Cells, which is a kind of normal cell in human bladder. Hela and 5637 are cervical cancer cell line and bladder cancer cell line, respectively. We set two groups in each cell lines, one have Ack, an unnatural amino acid, in the culture medium, and another do not have it. The luminescence intensity of 5637 with Ack in the medium is much higher than other groups, which indicates that the specificity of the two promoters are high enough and our orthogonal system is working.(Fig. 2)

Sequence and Features

Design Notes

Both shTERT promoter and tRNA are achieved from Shenzhen Second People's Hospital. We designed primers and amplified the gene sequences from psi-Check2 vector. Using 3A Assembly method, we constructed hTERT and tRNA in pSB1C3.

Source

Both shTERT promoter and tRNA are achieved from Shenzhen Second People's Hospital.