Difference between revisions of "Part:BBa K1355004"

Line 1: Line 1:
 
<partinfo>BBa_K1355004 short</partinfo>
 
<partinfo>BBa_K1355004 short</partinfo>
  
The biorremediator of mercury device is composed by our “Essential Biobrick” (BBa_K1355001) - a bidiretional promotor regulated by the MerR protein + MerA translational unit (BBa_K1355000) - a strong RBS + mercury ion reductase + double terminator BBa_B0015, represented below:
+
To develop a bioremediator, we designed a biobrick device to express MerA protein in mercury’s occurrence. The Mercury ions’ bioremediator device biobrick (BBa_K1355004) is composed by mer bidirectional promoter (BBa_K1355001) attached to the MerA translational unit (BBa_K1355000). It has dual function: A) In reverse: MerR protein regulator transcription; and B) In forward: transcription of MerP - MerT - MerA proteins, as represented below:
  
 
[[File:L6.jpg]]
 
[[File:L6.jpg]]
  
In presence of mercury, MerR protein will bind to it so MerT, MerP and MerA protein will be expressed and bioremediation will start! MerP and MerT proteins are responsible for transporting mercury from the periplasm to cytoplasm, leading it to mercury ion reductase (MerA)! The beautiful MerA is responsible for reduction from Hg2+ in Hg0, which is volatile at room temperature and able to passively leave the bacteria.  
+
 
 +
In absence of mercury, MerR forms a MerR-promoter-operator complex, preventing RNA polymerase to recognize the promoter, consequently, mRNA for MerPT and MerA will not be transcript. In presence of Hg2+, MerR protein binds to this element and dissociates from the promoter-operator complex, allowing MerPT and MerA expression, as represented below:
 +
 
 +
[[File:br4.png]]
 +
 
 +
 
 +
When MerT, MerP and MerA protein are expressed, the bioremediation will start! MerP and MerT proteins are responsible for transporting mercury from the periplasm to cytoplasm, leading it to mercury ion reductase (MerA)! The beautiful MerA is responsible for reduction from Hg<sup>2+</sup> in Hg<sup>0</sup>, which is volatile at room temperature and able to passively leave the bacteria.  
  
 
[[File:Bioremediaaator.jpg]]
 
[[File:Bioremediaaator.jpg]]

Revision as of 03:53, 17 October 2014

Mercury ions bioremediating device

To develop a bioremediator, we designed a biobrick device to express MerA protein in mercury’s occurrence. The Mercury ions’ bioremediator device biobrick (BBa_K1355004) is composed by mer bidirectional promoter (BBa_K1355001) attached to the MerA translational unit (BBa_K1355000). It has dual function: A) In reverse: MerR protein regulator transcription; and B) In forward: transcription of MerP - MerT - MerA proteins, as represented below:

L6.jpg


In absence of mercury, MerR forms a MerR-promoter-operator complex, preventing RNA polymerase to recognize the promoter, consequently, mRNA for MerPT and MerA will not be transcript. In presence of Hg2+, MerR protein binds to this element and dissociates from the promoter-operator complex, allowing MerPT and MerA expression, as represented below:

Br4.png


When MerT, MerP and MerA protein are expressed, the bioremediation will start! MerP and MerT proteins are responsible for transporting mercury from the periplasm to cytoplasm, leading it to mercury ion reductase (MerA)! The beautiful MerA is responsible for reduction from Hg2+ in Hg0, which is volatile at room temperature and able to passively leave the bacteria.

Bioremediaaator.jpg

Figure 1: Mercury Bacter Hg bioremediator (DH5-alpha transformed with BBa_K1355004)

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 988
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 586
    Illegal NgoMIV site found at 1160
    Illegal NgoMIV site found at 2397
    Illegal NgoMIV site found at 2459
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal SapI site found at 579