Difference between revisions of "Part:BBa K1321005"
Line 2: Line 2:
 
<partinfo>BBa_K1321005 short</partinfo>
 
<partinfo>BBa_K1321005 short</partinfo>
  
−
Synthetic Phytochelatin EC(20) in Freiburg fusion format (RFC[25]) to allow for easy use in fusion proteins.
+
Heavy metal-binding synthetic phytochelatin EC20 in Freiburg format (RFC[25]) to allow for easy use in fusion proteins.
  
−
<!-- Add more about the biology of this part here
 
 
===Usage and Biology===
 
===Usage and Biology===
  
−
<!-- -->
+
Synthetic phytochelatins are analogues of phytochelatins (PCs); cysteine-rich peptides of the general structure (γ-GluCys)n-Gly (n~2-5) which bind and sequester heavy metals, with a role in detoxification [1]. PCs are found mainly in plants but also in other organisms including diatoms, fungi, algae (including cyanobacteria) and some invertebrates [1,2]. Natively, the PCs are enzymatically synthesized by phytochelatin synthase (PCS) from a glutathione (GSH) precursor and the amino acids in the resulting peptide are linked by the non-standard gamma peptide bonds [1,2]. However, genetically encoded analogues (containing normal alpha-peptide bonds) of different number Glu-Cys (EC) repeats have been characterised, with the EC20 having the highest binding [3].
−
<span class='h3bb'>Sequence and Features</span>
+
 
 +
The main metal PCs confer tolerance to is Cadmium [1] and EC20 peptide has showed good binding whilst fused to a cellulose binding domain (CBD) for water purification [4] and when anchored to bacterial cell membrane to confer Cd2+ tolerance [3,5]. PC EC20 has also been shown to bind many more heavy metals. For example, when displayed on the surface of Cupriavidus metallidurans, the cells capacity to adsorb ions increased by 31 to 219% depending on the ion (table 1, [6]). These binding properties of PC EC20 have been utilised in applications including a regeneratable biosensor of  Hg2+, Cd2+, Pb2+, Cu2+ and Zn2+ ions to 100 fM–10 mM [7], and to target CdSe/ZnS quantum dots to streptavidin expressing HeLa cells when biotinylated [8].
 +
 
 +
{| class="wikitable"
 +
|+
 +
|-
 +
|'''Ion'''
 +
|'''Approximate adsorption increase'''
 +
|-
 +
|Zn2+
 +
|219 %
 +
|-
 +
|Pb2+
 +
|210 %
 +
|-
 +
|Cu2+
 +
|76 %
 +
|-
 +
|Cd2+
 +
|59 %
 +
|-
 +
|Ni2+
 +
|45 %
 +
|-
 +
|Mn2+
 +
|31 %
 +
|-
 +
|Co2+
 +
|marginal
 +
|}'''Table 1.''' Metal ion adsorption increase of ''C. metallidurans'' cells with PC EC20 displayed on cell surface, compared to negative control taken from a study by Biondo ''et al'' 2012 [6].
 +
 
 +
 
 +
===Sequence and Features===
 
<partinfo>BBa_K1321005 SequenceAndFeatures</partinfo>
 
<partinfo>BBa_K1321005 SequenceAndFeatures</partinfo>
  
Line 16: Line 47:
 
<partinfo>BBa_K1321005 parameters</partinfo>
 
<partinfo>BBa_K1321005 parameters</partinfo>
 
<!-- -->
 
<!-- -->
 +
 +
===References===
 +
1. Cobbett, C. & Goldsbrough, P. (2002) Phytochelatins and metallothioneins: roles in heavy metal detoxification and homeostasis. Annual review of plant biology. 53, 159–182.
 +
 +
2. Rea, P.A. (2012) Phytochelatin synthase: of a protease a peptide polymerase made. Physiologia plantarum. 145 (1), 154–164.
 +
 +
3.Bae, W., Chen, W., Mulchandani, A. & Mehra, R.K. (2000) Enhanced bioaccumulation of heavy metals by bacterial cells displaying synthetic phytochelatins. Biotechnology and bioengineering. 70 (5), 518–524.
 +
 +
4. Xu, Z., Bae, W., Mulchandani, A., Mehra, R.K., et al. (2002) Heavy Metal Removal by Novel CBD-EC20 Sorbents Immobilized on Cellulose. Biomacromolecules. [Online] 3 (3), 462–465.
 +
 +
5. Chaturvedi, R. & Archana, G. (2014) Cytosolic expression of synthetic phytochelatin and bacterial metallothionein genes in Deinococcus radiodurans R1 for enhanced tolerance and bioaccumulation of cadmium. Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine. 27 (3), 471–482.
 +
 +
6. Biondo, R., da Silva, F.A., Vicente, E.J., Souza Sarkis, J.E., et al. (2012) Synthetic phytochelatin surface display in Cupriavidus metallidurans CH34 for enhanced metals bioremediation. Environmental science & technology. 46 (15), 8325–8332.
 +
 +
7. Bontidean, I., Ahlqvist, J., Mulchandani, A., Chen, W., et al. (2003) Novel synthetic phytochelatin-based capacitive biosensor for heavy metal ion detection. Biosensors and Bioelectronics. 18 (5-6), 547–553.
 +
 +
8.Pinaud, F., King, D., Moore, H.-P. & Weiss, S. (2004) Bioactivation and cell targeting of semiconductor CdSe/ZnS nanocrystals with phytochelatin-related peptides. Journal of the American Chemical Society. 126 (19), 6115–6123.

Revision as of 17:15, 14 October 2014

Synthetic Phytochelatin EC(20) RFC[25]

Heavy metal-binding synthetic phytochelatin EC20 in Freiburg format (RFC[25]) to allow for easy use in fusion proteins.

Usage and Biology

Synthetic phytochelatins are analogues of phytochelatins (PCs); cysteine-rich peptides of the general structure (γ-GluCys)n-Gly (n~2-5) which bind and sequester heavy metals, with a role in detoxification [1]. PCs are found mainly in plants but also in other organisms including diatoms, fungi, algae (including cyanobacteria) and some invertebrates [1,2]. Natively, the PCs are enzymatically synthesized by phytochelatin synthase (PCS) from a glutathione (GSH) precursor and the amino acids in the resulting peptide are linked by the non-standard gamma peptide bonds [1,2]. However, genetically encoded analogues (containing normal alpha-peptide bonds) of different number Glu-Cys (EC) repeats have been characterised, with the EC20 having the highest binding [3].

The main metal PCs confer tolerance to is Cadmium [1] and EC20 peptide has showed good binding whilst fused to a cellulose binding domain (CBD) for water purification [4] and when anchored to bacterial cell membrane to confer Cd2+ tolerance [3,5]. PC EC20 has also been shown to bind many more heavy metals. For example, when displayed on the surface of Cupriavidus metallidurans, the cells capacity to adsorb ions increased by 31 to 219% depending on the ion (table 1, [6]). These binding properties of PC EC20 have been utilised in applications including a regeneratable biosensor of Hg2+, Cd2+, Pb2+, Cu2+ and Zn2+ ions to 100 fM–10 mM [7], and to target CdSe/ZnS quantum dots to streptavidin expressing HeLa cells when biotinylated [8].

Ion Approximate adsorption increase
Zn2+ 219 %
Pb2+ 210 %
Cu2+ 76 %
Cd2+ 59 %
Ni2+ 45 %
Mn2+ 31 %
Co2+ marginal
Table 1. Metal ion adsorption increase of C. metallidurans cells with PC EC20 displayed on cell surface, compared to negative control taken from a study by Biondo et al 2012 [6].


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


References

1. Cobbett, C. & Goldsbrough, P. (2002) Phytochelatins and metallothioneins: roles in heavy metal detoxification and homeostasis. Annual review of plant biology. 53, 159–182.

2. Rea, P.A. (2012) Phytochelatin synthase: of a protease a peptide polymerase made. Physiologia plantarum. 145 (1), 154–164.

3.Bae, W., Chen, W., Mulchandani, A. & Mehra, R.K. (2000) Enhanced bioaccumulation of heavy metals by bacterial cells displaying synthetic phytochelatins. Biotechnology and bioengineering. 70 (5), 518–524.

4. Xu, Z., Bae, W., Mulchandani, A., Mehra, R.K., et al. (2002) Heavy Metal Removal by Novel CBD-EC20 Sorbents Immobilized on Cellulose. Biomacromolecules. [Online] 3 (3), 462–465.

5. Chaturvedi, R. & Archana, G. (2014) Cytosolic expression of synthetic phytochelatin and bacterial metallothionein genes in Deinococcus radiodurans R1 for enhanced tolerance and bioaccumulation of cadmium. Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine. 27 (3), 471–482.

6. Biondo, R., da Silva, F.A., Vicente, E.J., Souza Sarkis, J.E., et al. (2012) Synthetic phytochelatin surface display in Cupriavidus metallidurans CH34 for enhanced metals bioremediation. Environmental science & technology. 46 (15), 8325–8332.

7. Bontidean, I., Ahlqvist, J., Mulchandani, A., Chen, W., et al. (2003) Novel synthetic phytochelatin-based capacitive biosensor for heavy metal ion detection. Biosensors and Bioelectronics. 18 (5-6), 547–553.

8.Pinaud, F., King, D., Moore, H.-P. & Weiss, S. (2004) Bioactivation and cell targeting of semiconductor CdSe/ZnS nanocrystals with phytochelatin-related peptides. Journal of the American Chemical Society. 126 (19), 6115–6123.