Difference between revisions of "Part:BBa K1352006:Experience"
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[[File:K1352006 standard digest.PNG|600px|thumb|left|Figure 2]] | [[File:K1352006 standard digest.PNG|600px|thumb|left|Figure 2]] | ||
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Figure 2; a restriction digest verification of plasmid K1352006 | Figure 2; a restriction digest verification of plasmid K1352006 | ||
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XS. K1352006 plasmid digested with XbaI and Spe1 | XS. K1352006 plasmid digested with XbaI and Spe1 | ||
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DNA Sequencing | DNA Sequencing | ||
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The recombinant plasmid was Sanger-sequenced with the following sequencing primers. “G101” is a reverse primer, the rest are forward primers. | The recombinant plasmid was Sanger-sequenced with the following sequencing primers. “G101” is a reverse primer, the rest are forward primers. | ||
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[[File:MCS in INP-FLAG.PNG|600px|thumb|left|Figure 3]] | [[File:MCS in INP-FLAG.PNG|600px|thumb|left|Figure 3]] | ||
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Revision as of 15:10, 4 October 2014
This experience page is provided so that any user may enter their experience using this part.
Please enter
how you used this part and how it worked out.
Applications of BBa_K1352006
User Reviews
UNIQ88b8c1fea06c80eb-partinfo-00000000-QINU UNIQ88b8c1fea06c80eb-partinfo-00000001-QINU
Restriction digest + Gel electrophoresis
Figure 1; a Xba1 + HindIII restriction digest screen of recombinants. The recombinant which went on to become K1352006 is in lane 5. The “L” lane is DNA marker (ladder). The arrows are to highlight the distance travelled by the HindIII-negative recombinants.
Figure 2; a restriction digest verification of plasmid K1352006
For figure 2: the letters indicate the following:
L. 10,000bp – 500bp DNA marker “ladder”
N. K1352006 plasmid digested with no enzymes
E. K1352006 plasmid digested with EcoRI
X. K1352006 plasmid digested with XbaI
S. K1352006 plasmid digested with SpeI
P. K1352006 plasmid digested with PstI
EP. K1352006 plasmid digested with EcoRI and PstI
XS. K1352006 plasmid digested with XbaI and Spe1
DNA Sequencing
The recombinant plasmid was Sanger-sequenced with the following sequencing primers. “G101” is a reverse primer, the rest are forward primers.
“G101” (attaccgcctttgagtgagc)
“G100” (tgccacctgacgtctaagaa)
“35 INP-SEQ 1” (ccgattcattaatgcagctgg)
“36 INP-SEQ 2” (gaggttgctgttgccgac)
“37 INP-SEQ 3” (ggtgtggaagccgacattc)
The plasmid insert was found to be exactly as desired. Highlighted below is the MCS excerpt from the “G101” primer results (“G101” is a reverse primer which is why the sequence is in reverse complement).
Conclusions
The construct sequence was produced exactly as designed; the full FLAG-tag – with BglII and HindIII sites – is present at the N-terminus of the linker sequence after INP. However, despite all this, possibly due to YFP’s C and N termini being on the same side of it, the FLAG-tag is not accessible to antibodies.