Difference between revisions of "Part:BBa K1129050"
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ATCCR1 is a Cinnamoyl CoA reductase found in Artabidopsis thaliana it functions to reduce the cinnamoyl coA molecule into cinnamaldehyde by utilizing the favourable kinetics offered by releasing the coA group. This enzyme belongs to the oxioreductase family and is involved in both the phenylpropanoid pathway and thus in the degradation of lignin.
 
ATCCR1 is a Cinnamoyl CoA reductase found in Artabidopsis thaliana it functions to reduce the cinnamoyl coA molecule into cinnamaldehyde by utilizing the favourable kinetics offered by releasing the coA group. This enzyme belongs to the oxioreductase family and is involved in both the phenylpropanoid pathway and thus in the degradation of lignin.
  
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===Applications of BBa_K1129050===
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<p align=center>https://static.igem.org/mediawiki/2013/2/2a/Const._EncP_%2B_AtCCR1.jpg</p>
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===Experience===
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'''Figure 1'''. Compound generation identification by GC-MS. Chromatograms (left) and mass spectra (right) for select peaks are shown. Structures represent predictions based on library matching or comparison to standards. Controls represent plasmids missing the gene of interest. Top) GC-MS of a Cinnamic acid (10.580) control. Bottom) Conversion of Phenylalanine to Cinnamaldehyde (11.819) through the cinnamic acid intermediate(10.580) via the EncP, 4CL, and ATCCR1 gene construct under a constitutive promoter.  The mass spec data shows a highly oxidized cinnamaldehyde that may have resulted from poor sample preparation
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===User Reviews===
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<partinfo>BBa_K1129050 AddReview number</partinfo>
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<I>Username</I>
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Enter the review inofrmation here.
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'''Resources'''
 
'''Resources'''
  

Revision as of 02:30, 25 October 2013

Cinnamoyl-CoA reductase from Arabidopsis thaliana under arabinose promoter

ATCCR1 is a Cinnamoyl CoA reductase found in Artabidopsis thaliana it functions to reduce the cinnamoyl coA molecule into cinnamaldehyde by utilizing the favourable kinetics offered by releasing the coA group. This enzyme belongs to the oxioreductase family and is involved in both the phenylpropanoid pathway and thus in the degradation of lignin.

Applications of BBa_K1129050

Const._EncP_%2B_AtCCR1.jpg

Experience

Figure 1. Compound generation identification by GC-MS. Chromatograms (left) and mass spectra (right) for select peaks are shown. Structures represent predictions based on library matching or comparison to standards. Controls represent plasmids missing the gene of interest. Top) GC-MS of a Cinnamic acid (10.580) control. Bottom) Conversion of Phenylalanine to Cinnamaldehyde (11.819) through the cinnamic acid intermediate(10.580) via the EncP, 4CL, and ATCCR1 gene construct under a constitutive promoter. The mass spec data shows a highly oxidized cinnamaldehyde that may have resulted from poor sample preparation

User Reviews

UNIQfa6d0ae91f1dc7b7-partinfo-00000001-QINU UNIQfa6d0ae91f1dc7b7-partinfo-00000002-QINU Resources

http://www.uniprot.org/uniprot/Q1H8P3

http://www.arabidopsis.org/servlets/TairObject?id=137093&type=locus

http://www.genome.jp/kegg-bin/show_pathway?map00940

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 125
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 357
    Illegal BamHI site found at 65
    Illegal XhoI site found at 247
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 459
  • 1000
    COMPATIBLE WITH RFC[1000]