<img src="https://static.igem.org/mediawiki/2013/5/54/TALE_B_and_TALE_A_B-lac_DNA_capture_assay.png" alt="TALE DNA Capture Assay" width="800" height="600">
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<figcaption>
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<p><b>Figure 6: </b> TALE capture assay was done with TALE B (<a href="https://parts.igem.org/wiki/index.php?title=Part:BBa_K1189001">
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<span class="Green"><b>
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BBa_K1189001
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</b></span>
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</a >)and TALE A B-lac fusion (<a href=" https://parts.igem.org/wiki/index.php?title=Part:BBa_K1189031">
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<span class="Green"><b>
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BBa_K1189031
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</b></span>
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</a >) and DNA with both target sequences. If capture is successful, the B-lac is present in the well giving a colour change from pink to yellow when subjected to benzylpenicillin substrate solution within 20 minutes. The only wells that change colour are the first four wells which contain TALE B, specific DNA, and TALE A B-lac fusion and our positive control wells which are the controls for our fusion TALE A B-lac protein and our positive recombinant b-lac. All our other controls including our test using a non-specific sequence of DNA remained pink . This preliminary characterization data demonstrates that the TALEs are able to bind to DNA with specificity. Additionally it also shows that our system of capturing DNA with two detector TALEs and then subsequent reporting of the DNA’s presence works.
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</figcaption>
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</figure>
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===Usage and Biology===
===Usage and Biology===
Revision as of 01:53, 5 October 2013
TALE-A linked to beta-lactamase with a his tag under a lacI promoter
This part was built to function as both our detector (TALE A) and our reporter (beta-lactamase). The part was built with the lacI IPTG inducible promoter J04500, with RBS, and it has a His-tag for protein purification.
TALE A was inspired by the award winning TALE A from the award winning 2012 Slovenian iGEM project. The iGEM Calgary 2013 used this TALE and its associated DNA binding sequence to build a proof of concept TALE based DNA detector. In the case of BBa_K1189031, the Calgary team used beta-lactamase as a reporter enzyme to indicate when the TALE is bound to DNA.
Applications of BBa_K1189031
Sequence and Features
Assembly Compatibility:
10
COMPATIBLE WITH RFC[10]
12
INCOMPATIBLE WITH RFC[12]
Illegal NheI site found at 1922
21
COMPATIBLE WITH RFC[21]
23
COMPATIBLE WITH RFC[23]
25
INCOMPATIBLE WITH RFC[25]
Illegal NgoMIV site found at 2651 Illegal AgeI site found at 677 Illegal AgeI site found at 1258