Difference between revisions of "Part:BBa K1092003:Design"
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===Design Notes=== | ===Design Notes=== | ||
+ | We codon optimized ''catechol 1,2-dioxygenase'' (EC 1.13.11.1)gene from ''Pseudomonas putida'' KT 2400. | ||
===Source=== | ===Source=== |
Revision as of 00:53, 28 September 2013
T7-RBS-Dioxygenase
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21INCOMPATIBLE WITH RFC[21]Illegal BglII site found at 176
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]
Design Notes
We codon optimized catechol 1,2-dioxygenase (EC 1.13.11.1)gene from Pseudomonas putida KT 2400.
Source
Gene synthesis
References
[1] CAO, B., GENG, A. and LOH, K., 2008. Induction of ortho- and meta-cleavage pathways in Pseudomonas in biodegradation of high benzoate concentration: MS identification of catabolic enzymes. Applied Microbiology and Biotechnology, 81(1), pp. 99-107.
[2] KIM, Y.H., CHO, K., YUN, S., KIM, J.Y., KWON, K., YOO, J.S. and KIM, S.I., 2006. Analysis of aromatic catabolic pathways in Pseudomonas putida KT 2440 using a combined proteomic approach: 2-DE/MS and cleavable isotope-coded affinity tag analysis. Proteomics, 6(4), pp. 1301-1318.
[3] HADIBARATA, T. and KRISTANTI, R.A., 2012. Identification of metabolites from benzo[a]pyrene oxidation by ligninolytic enzymes of Polyporus sp. S133. Journal of environmental management, 111(0), pp. 115-119.
[4] Rosenberg D. 1998. Methods for analyzing trend data. In: Analytic Methods in Maternal and Child Health. Editors: Handler, A, Rosenberg, D, Monahan, C, Kennelly, J. Washington DC: Maternal and Child Health Bureau, HRSA, DHHS, pp. 191–231.