Difference between revisions of "Part:BBa K1031804"

 
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<partinfo>BBa_K1031804 short</partinfo>
 
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Pu-32-sfGFP-TT (XylR)
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== '''Structure''' ==
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'''Fig 1''' 
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== '''Sequence and Features''' ==
  
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===Usage and Biology===
 
  
 
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<span class='h3bb'>Sequence and Features</span>
 
<span class='h3bb'>Sequence and Features</span>
 
<partinfo>BBa_K1031804 SequenceAndFeatures</partinfo>
 
<partinfo>BBa_K1031804 SequenceAndFeatures</partinfo>
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== '''Construction and tunning''' ==
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''Pc'' promoter J23114 is selected to initiate the transcription of XylR. Based on this circuit, we constructed a library of RBS (Ribosome Binding Site) including B0031[https://parts.igem.org/Part:BBa_B0031], B0032[https://parts.igem.org/Part:BBa_B0032], B0033[https://parts.igem.org/Part:BBa_B0033] and B0034[https://parts.igem.org/Part:BBa_B0034] for tunning for expression level of reporter gene sfGFP. K1031804 consists of Pu promoter, RBS B0032 and reporter gene sfGFP ('''Fig 2a'''). Induction ratio was calculated from fluorescence intensity, showing the performance of K1031804('''Fig 2b''')
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'''Fig 2''' Construction and tunning of reporter circuit ''Pu''-B0032-sfGFP ('''a''') The orange arrow represents ''Pu'' promoter for XylR. The green oval stands for RBS B0032. sfGFP coding sequence is shown with dark blue, while terminator B0015[https://parts.igem.org/Part:BBa_B0015] is in dark red. ('''b''') Horizontal axis represents biosensor circuit J23114-XylR adopting different RBS. Vertical axis stands for induction ratio. The dashed box refers to data for reporter circuit ''Pu''-B0032-sfGFP in collocation with biosensor circuit J23114-XylR.
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===Functional Parameters===
 
===Functional Parameters===
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<partinfo>BBa_K1031804 parameters</partinfo>
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<partinfo>BBa_K1035201521 parameters</partinfo>
 
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Revision as of 15:41, 25 September 2013

Pu-B0032-sfGFP-Terminator (XylR)


Structure

Fig 1


Sequence and Features

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 167
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal SapI.rc site found at 218


Construction and tunning

Pc promoter J23114 is selected to initiate the transcription of XylR. Based on this circuit, we constructed a library of RBS (Ribosome Binding Site) including B0031[1], B0032[2], B0033[3] and B0034[4] for tunning for expression level of reporter gene sfGFP. K1031804 consists of Pu promoter, RBS B0032 and reporter gene sfGFP (Fig 2a). Induction ratio was calculated from fluorescence intensity, showing the performance of K1031804(Fig 2b)

Fig 2 Construction and tunning of reporter circuit Pu-B0032-sfGFP (a) The orange arrow represents Pu promoter for XylR. The green oval stands for RBS B0032. sfGFP coding sequence is shown with dark blue, while terminator B0015[5] is in dark red. (b) Horizontal axis represents biosensor circuit J23114-XylR adopting different RBS. Vertical axis stands for induction ratio. The dashed box refers to data for reporter circuit Pu-B0032-sfGFP in collocation with biosensor circuit J23114-XylR.