Difference between revisions of "Part:BBa K863111"
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<partinfo>BBa_K863111 short</partinfo> | <partinfo>BBa_K863111 short</partinfo> | ||
− | Cellulose binding Domain of Clostridium cellulovorans [http://www.ncbi.nlm.nih.gov/nuccore/M73817 cellulose binding protein gene (cbp A)] | + | Cellulose binding Domain (CBDclos) of ''Clostridium cellulovorans'' [http://www.ncbi.nlm.nih.gov/nuccore/M73817 cellulose binding protein gene (cbp A)] in Standard 25 (Freiburg). |
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===Usage and Biology=== | ===Usage and Biology=== | ||
+ | The CBDclos is an N-terminal domain quite close to the start of the protein-sequence (Figure 1). The NCBI-BLAST identified 92 amino acids (276 bases; green bar) as the protein domain. 12 bases (4 amino acids) were taken as conserved sequence upstream and 6 bases (2AS) downstream of the domain to secure natural folding of the domain. | ||
+ | [[image:Bielefeld2012_Cellubp.jpg|800px|thumb|center|Figure 1: protein-Blast of the Clostridium cellulovorans [http://www.ncbi.nlm.nih.gov/nuccore/M73817 cellulose binding protein gene (cbp A)]]] | ||
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Revision as of 12:05, 26 September 2012
Cellulose binding domain of C. cellulovorans cellulose binding protein gene (Freiburg-Standard)
Cellulose binding Domain (CBDclos) of Clostridium cellulovorans [http://www.ncbi.nlm.nih.gov/nuccore/M73817 cellulose binding protein gene (cbp A)] in Standard 25 (Freiburg).
Usage and Biology
The CBDclos is an N-terminal domain quite close to the start of the protein-sequence (Figure 1). The NCBI-BLAST identified 92 amino acids (276 bases; green bar) as the protein domain. 12 bases (4 amino acids) were taken as conserved sequence upstream and 6 bases (2AS) downstream of the domain to secure natural folding of the domain.
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal NgoMIV site found at 4
Illegal AgeI site found at 310 - 1000COMPATIBLE WITH RFC[1000]