Difference between revisions of "Part:BBa K883201"
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This construct produces Hepatitis B core antigen subunits. These subunits can be used to make HepBcAg Virus-Like Particles. The promotor and RBS that have been added to the gene allow induced expression of the subunits which increases the yield. | This construct produces Hepatitis B core antigen subunits. These subunits can be used to make HepBcAg Virus-Like Particles. The promotor and RBS that have been added to the gene allow induced expression of the subunits which increases the yield. | ||
− | + | This BioBrick can serve as a template for modifications in the external loop of the VLP. | |
− | + | = Protolcols = | |
+ | |||
+ | Transform a ''E. coli'' strain that is equipped for protein expression (e.g. BL21) with the BioBrick. | ||
+ | == Growing Culture == | ||
+ | |||
+ | === Reagents & Materials == | ||
+ | |||
+ | For a 50 mL culture: | ||
+ | |||
+ | reagents: | ||
+ | <ul> | ||
+ | <li>60 mL of LB</li> | ||
+ | <li>antibiotics (C)</li> | ||
+ | <li>0.25 mL of IPTG stock solution 250 mM</li> | ||
+ | <li>MQ-water</li> | ||
+ | </ul> | ||
+ | |||
+ | materials: | ||
+ | <ul> | ||
+ | <li>Pipettes and pipettes points</li> | ||
+ | <li>250 ml Erlenmeyer</li> | ||
+ | <li>Greiner tubes</li> | ||
+ | <li>Freezer</li> | ||
+ | <li>Centrifuge for Greiner tubes</li> | ||
+ | </ul> | ||
+ | |||
+ | === Procedure === | ||
+ | |||
+ | <ol> | ||
+ | <li>Prepare a Erlenmeyer flask with 50mL of LB-medium and keep it at 37°C</li> | ||
+ | <li>Pick E.coli BL21 from a plate and grow them over night in a 10 mL LB culture containing 50mg/L antibiotics (chloramphenicol) at 37°C</li> | ||
+ | <li>Inoculate the large flask with 1 mL of the overnight culture and grow at 37°C for 2.5h until the OD600 reaches approx. 0.6</li> | ||
+ | <li>Induce with '''1.25 mM IPTG''' (0.25 mL of a 250 mM stock)</li> | ||
+ | <li>Incubate at 37°C for 4 h</li> | ||
+ | <li>Centrifuge the cells in 50ml greiner tubes at 4700 rpm for 18 minutes</li> | ||
+ | <li>Decant the supernatant and resuspend the pellets in ± 10 mL washing buffer each</li> | ||
+ | <li>Centrifuge again at 4700 rpm for 18 minutes</li> | ||
+ | <li>Decant the supernatant and centrifuge for another minute</li> | ||
+ | <li>Pipette any liquid to clear the tube of supernatant</li> | ||
+ | <li>(possible to freeze the cells to -20°C at this point)</li> | ||
+ | </ol> | ||
+ | |||
+ | |||
+ | == Dialysis of the VLPs == | ||
+ | |||
+ | |||
+ | === Reagents & Materials === | ||
+ | |||
+ | Reagents: | ||
+ | <ul> | ||
+ | <li>Formation Buffer</li> | ||
+ | <li>Formation Buffer + 8M urea</li> | ||
+ | </ul> | ||
+ | |||
+ | Materials: | ||
+ | <ul> | ||
+ | <li>Pipettes + pipettepoints</li> | ||
+ | <li>Greinertubes</li> | ||
+ | <li>Dialysis tubing</li> | ||
+ | <li>Vortex</li> | ||
+ | <li>French Press</li> | ||
+ | <li>Centrifuge for Greiner tubes</li> | ||
+ | <li>Sorval or a similar centrifuge</li> | ||
+ | <li>Coldroom</li> | ||
+ | </ul> | ||
+ | |||
+ | === Procedure === | ||
+ | |||
+ | The temperature of the VLP’s is very important. All the work should be done in the cold room (4°C) and the used tubes have to be on ice. | ||
+ | |||
+ | <ol> | ||
+ | <li>Resuspend the cells in 5 mL of Disassembly buffer</li> | ||
+ | <li>Disrupt the cells by french press, cell pressure: 1000</li> | ||
+ | <li>Add Disassembly buffer to 25 mL total volume</li> | ||
+ | <li>Centrifuge the lysate until the insoluble fraction is pelleted – 4°C, 4700 rpm, 18 min</li> | ||
+ | <li>Remove the supernatant completely and dissolve the pellet in 10 mL of cold Disassembly buffer containing 8 M urea (about 10-15 min). Vortex the pellet to easily resuspend the while cooling on ice. Do not allow the buffer to heat up above 25°C</li> | ||
+ | <li>Allow the pellet to dissolve for 2-5 minutes</li> | ||
+ | <li>Dilute the 10 mL of 8 M urea/ Disassembly buffer with 15 mL Disassembly buffer. If crystals form, the batch should be discarded</li> | ||
+ | <li>Pellet everything that is not dissolved by centrifuging at 15000 rpm at 4°C for 15 minutes (Sorvall ultracentrifuge in the basement)</li> | ||
+ | <li>Transfer the supernatant to a clean 50 mL Greiner tube</li> | ||
+ | <li>Prepare a piece of dialysis tubing with a large diameter by soaking it in cooking demiwater until it opens up</li> | ||
+ | <li>Put a tight knot on one side and fill the tubing with the supernatant</li> | ||
+ | <li>Knot the tube on the other side leaving a small air bubble inside</li> | ||
+ | <li>Dialyse the tube (about 25 mL volume) against 1x Dialysis buffer for 4 hours or overnight</li> | ||
+ | <li>Dialysis is performed 6 times against 1x Formation(4h per dialysis, or overnight)</li> | ||
+ | </ol> | ||
+ | |||
+ | == | ||
<!-- Add more about the biology of this part here | <!-- Add more about the biology of this part here |
Revision as of 16:22, 19 September 2012
Hepatitits B core antigen with IPTG induced promotor
This construct produces Hepatitis B core antigen subunits. These subunits can be used to make HepBcAg Virus-Like Particles. The promotor and RBS that have been added to the gene allow induced expression of the subunits which increases the yield.
This BioBrick can serve as a template for modifications in the external loop of the VLP.
Protolcols
Transform a E. coli strain that is equipped for protein expression (e.g. BL21) with the BioBrick.
Growing Culture
= Reagents & Materials
For a 50 mL culture:
reagents:
- 60 mL of LB
- antibiotics (C)
- 0.25 mL of IPTG stock solution 250 mM
- MQ-water
materials:
- Pipettes and pipettes points
- 250 ml Erlenmeyer
- Greiner tubes
- Freezer
- Centrifuge for Greiner tubes
Procedure
- Prepare a Erlenmeyer flask with 50mL of LB-medium and keep it at 37°C
- Pick E.coli BL21 from a plate and grow them over night in a 10 mL LB culture containing 50mg/L antibiotics (chloramphenicol) at 37°C
- Inoculate the large flask with 1 mL of the overnight culture and grow at 37°C for 2.5h until the OD600 reaches approx. 0.6
- Induce with 1.25 mM IPTG (0.25 mL of a 250 mM stock)
- Incubate at 37°C for 4 h
- Centrifuge the cells in 50ml greiner tubes at 4700 rpm for 18 minutes
- Decant the supernatant and resuspend the pellets in ± 10 mL washing buffer each
- Centrifuge again at 4700 rpm for 18 minutes
- Decant the supernatant and centrifuge for another minute
- Pipette any liquid to clear the tube of supernatant
- (possible to freeze the cells to -20°C at this point)
Dialysis of the VLPs
Reagents & Materials
Reagents:
- Formation Buffer
- Formation Buffer + 8M urea
Materials:
- Pipettes + pipettepoints
- Greinertubes
- Dialysis tubing
- Vortex
- French Press
- Centrifuge for Greiner tubes
- Sorval or a similar centrifuge
- Coldroom
Procedure
The temperature of the VLP’s is very important. All the work should be done in the cold room (4°C) and the used tubes have to be on ice.
- Resuspend the cells in 5 mL of Disassembly buffer
- Disrupt the cells by french press, cell pressure: 1000
- Add Disassembly buffer to 25 mL total volume
- Centrifuge the lysate until the insoluble fraction is pelleted – 4°C, 4700 rpm, 18 min
- Remove the supernatant completely and dissolve the pellet in 10 mL of cold Disassembly buffer containing 8 M urea (about 10-15 min). Vortex the pellet to easily resuspend the while cooling on ice. Do not allow the buffer to heat up above 25°C
- Allow the pellet to dissolve for 2-5 minutes
- Dilute the 10 mL of 8 M urea/ Disassembly buffer with 15 mL Disassembly buffer. If crystals form, the batch should be discarded
- Pellet everything that is not dissolved by centrifuging at 15000 rpm at 4°C for 15 minutes (Sorvall ultracentrifuge in the basement)
- Transfer the supernatant to a clean 50 mL Greiner tube
- Prepare a piece of dialysis tubing with a large diameter by soaking it in cooking demiwater until it opens up
- Put a tight knot on one side and fill the tubing with the supernatant
- Knot the tube on the other side leaving a small air bubble inside
- Dialyse the tube (about 25 mL volume) against 1x Dialysis buffer for 4 hours or overnight
- Dialysis is performed 6 times against 1x Formation(4h per dialysis, or overnight)
==
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]