Difference between revisions of "Part:BBa K649104:Experience"
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| − | [[Image:Plsra.png|thumb|center| | + | [[Image:Plsra.png|thumb|center|400px|After four hours from OD590 reaching 0.15, we measured OD.<br>This work is done by Takuya Tsubaki.]] |
Revision as of 01:03, 4 October 2011
This experience page is provided so that any user may enter their experience using this part.
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how you used this part and how it worked out.
Applications of BBa_K649104
Fluorescence intensity of our lsrA promoter-gfp(BBa_649104) was much higher than that of promoterless-gfp(negative control), showing that our new lsrA promoter(BBa_649100) works. On the other hand, fluorescence intensity of lsrA promoter-gfp((BBa_117002)-gfp) was almost the same as promoterless-gfp(negative control), showing that lsrA promoter(BBa_K117002) does not work properly.The difference between lsrA promoter(BBa_K117002) and lsrA promoter(BBa_649100) is whether promoter contains CRP binding site or not. Our lsrA promoter(BBa_649100) contains this site but lsrA promoter(BBa_K117002) does not. According to Wang(2005) et al, cAMP-CRP directly binds to the upstream of promoter and stimulates expression of the lsr operon.
…TGTGAtctattcgTCGGA…
CRP recognition sites are shown in capital letter.BBa_K649100 contains this sites.
The working part we created allow the use of AI-2 as a signaling molecule, which is a very powerful tool to build complex Synthetic Biology systems.
[sample]
Ptet-gfp on pSB1A2(JD22597)
Promoterless-gfp on pSB6A1(JD22597)
PlsrA-gfp on pSB1A2(BBa_K649104)(JD22597)
PlsrA-gfp on pSB1A2(BBa_K11702-gfp)(JD22597)
JD22597 lacks lsrR.
[Method]
1.Overnight cultures of reporter strains grown at 37 °C in LB medium containing appropriate antibiotics were diluted 1:100 into 3 ml of LB medium and were incubated at 37 °C as fresh cultures.
2. After their OD590 reached 0.15, the fresh cultures were diluted 1:100.
3. After 4-hour incubation at 37 °C, 1 ml of each culture was moved to 1.6ml tube and its fluorescence intensity was measured with a flow cytometer.
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