Difference between revisions of "Part:BBa K678060"
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− | [[Image:22-7_back.jpeg|left| | + | [[Image:22-7_back.jpeg|left|440px|thumb|<b>DTU-Denmark-2 2011</b> Figure 4: ''Aspergillus nidulans'' Front]] |
− | [[Image:22-7_back_rettet.jpg|right| | + | [[Image:22-7_back_rettet.jpg|right|440px|thumb|<b>DTU-Denmark-2 2011</b> Figure 5: ''Aspergillus nidulans'' Back]] |
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Latest revision as of 15:42, 27 September 2011
pJEJAM12
pJEJAM12 is a plasmid that after digestion with NotI is intended to be transformed into Aspergillus nidulans and integrated into the genome by non-homologous end joining (NHEJ). The plasmid consists the strong constitutive gpdA promoter, green fluorescent protein (GFP), the trpC terminator, a pyrG marker cassette for selection, an ori for propagation in E. coli, and an ampR resistance cassette (Figure 1).
When pJEJAM12 was integrated into A. nidulans expression of the gene encoding GFP, resulted in an even distribution of GFP in the hyphae (Figure 3). When comparing figure 2 and figure 3 it can be seem that GFP was not expressed in all hyphae, this could be as a result of the integration by NHEJ as we in figure 3 and figure 4 can see that the integration must have impaired a gene or pathway of the transformant, a picture of the wild-type strain can be found [http://2011.igem.org/Team:DTU-Denmark-2/results/Proofofconcept/fungi#Wild%20type here].
Sequence and Features
- 10INCOMPATIBLE WITH RFC[10]Illegal XbaI site found at 3768
Illegal XbaI site found at 5324
Illegal XbaI site found at 8068
Illegal PstI site found at 140
Illegal PstI site found at 4609 - 12INCOMPATIBLE WITH RFC[12]Illegal NheI site found at 910
Illegal PstI site found at 140
Illegal PstI site found at 4609
Illegal NotI site found at 5281
Illegal NotI site found at 8107 - 21INCOMPATIBLE WITH RFC[21]Illegal BglII site found at 144
Illegal BamHI site found at 3049
Illegal BamHI site found at 4347
Illegal XhoI site found at 700
Illegal XhoI site found at 1082
Illegal XhoI site found at 4207 - 23INCOMPATIBLE WITH RFC[23]Illegal XbaI site found at 3768
Illegal XbaI site found at 5324
Illegal XbaI site found at 8068
Illegal PstI site found at 140
Illegal PstI site found at 4609 - 25INCOMPATIBLE WITH RFC[25]Illegal XbaI site found at 3768
Illegal XbaI site found at 5324
Illegal XbaI site found at 8068
Illegal PstI site found at 140
Illegal PstI site found at 4609
Illegal NgoMIV site found at 3685
Illegal AgeI site found at 1289
Illegal AgeI site found at 1437 - 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI site found at 4400
Illegal BsaI.rc site found at 1116
Illegal BsaI.rc site found at 3399
Illegal SapI site found at 322