Difference between revisions of "Part:BBa K553000:Design"

(Design Notes)
(Source)
Line 30: Line 30:
 
The gene was extracted by pcr from Agrobacterium Tumefaciens gDNA.
 
The gene was extracted by pcr from Agrobacterium Tumefaciens gDNA.
  
http://www.ncbi.nlm.nih.gov/nucleotide/81176483?report=genbank&log$=nuclalign&blast_rank=1&RID=7BS4G4AC014.
+
http://www.ncbi.nlm.nih.gov/gene/1224220
  
 
The sequencing revealed mutations in our strain that do not affect the part functionality.
 
The sequencing revealed mutations in our strain that do not affect the part functionality.
  
 
===References===
 
===References===

Revision as of 13:30, 19 September 2011

TraR trans-activator


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


Design Notes

the part was generated by using the following primers:


TraR fw

5' GTTTCTTCGAATTCGCGGCCGCTTCTAGATCGACGACTGGCTGGACAAGC 3'

TraR rev

5' GTTTCTTCCTGCAGCGGCCGCTACTAGTATCAGATGAGTTTCCGCCGGATG 3'


pcr protocol:

95° 5' | 10x (93° 30" | 56° 30" | 72° 40") | 23x ( (93° 30" | 65° 30" | 72° 40") | 72° 7' | 4° ∞


The part contains also the BBa_B0034 RBS and BBa_B0015 double terminator.

Source

The gene was extracted by pcr from Agrobacterium Tumefaciens gDNA.

http://www.ncbi.nlm.nih.gov/gene/1224220

The sequencing revealed mutations in our strain that do not affect the part functionality.

References