Difference between revisions of "Part:BBa K590015"

(Usage and Biology)
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===Usage and Biology===
 
===Usage and Biology===
This part consists of mamK gene from ''Magnetospirillum magneticum'' strain AMB-1, sfGFP in the backbone of [https://parts.igem.org/wiki/index.php?title=Part:BBa_K590014 pGA3k3]. It was made by Gibson Cloning.  
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This part consists of mamK gene from ''Magnetospirillum magneticum'' strain AMB-1, sfGFP in the backbone of [https://parts.igem.org/wiki/index.php?title=Part:BBa_K590011 pGA1C3]. It was made by Gibson Cloning Method.  
  
 
mamK was previously reported for its importance proper magnetosome chain organization in magnetic bacteria; it is bacterial actin-like cytoskeleton protein required for proper alignment of the magnetosomes in a chain.  
 
mamK was previously reported for its importance proper magnetosome chain organization in magnetic bacteria; it is bacterial actin-like cytoskeleton protein required for proper alignment of the magnetosomes in a chain.  

Revision as of 05:57, 19 September 2011

sfGFP_mamK_pGA1C3

This part was made by [http://2011.igem.org/Team:Washington UW iGEM Team 2011] and was contributed to the [http://2011.igem.org/Team:Washington/Magnetosomes/Results Magnetosome Toolkit].

Usage and Biology

This part consists of mamK gene from Magnetospirillum magneticum strain AMB-1, sfGFP in the backbone of pGA1C3. It was made by Gibson Cloning Method.

mamK was previously reported for its importance proper magnetosome chain organization in magnetic bacteria; it is bacterial actin-like cytoskeleton protein required for proper alignment of the magnetosomes in a chain.

This part was transformed into E.coli and fluorescent filament structures were observed:

MamK sfGFP 3k3-1 uwigem2011part.jpg


Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal PstI site found at 1430
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal PstI site found at 1430
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 1134
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal PstI site found at 1430
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal PstI site found at 1430
    Illegal NgoMIV site found at 1156
    Illegal NgoMIV site found at 1523
    Illegal NgoMIV site found at 1670
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal SapI.rc site found at 80
    Illegal SapI.rc site found at 1802