Difference between revisions of "Part:BBa K415504"
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<partinfo>BBa_K415504 short</partinfo> | <partinfo>BBa_K415504 short</partinfo> | ||
− | + | [[Image:TRET-logic.png|thumb|right|Figure 1. Schematic depicting the schematic of the TREt system.]] | |
− | + | L1L2 Mammoblock entry vector containing the Rtta3_2a_hygro construct. rtTA3 is a DOX-inducible transcription factor controlling expression of the TRE promoter; Hygro is a selection marker against the Hygromycin antibiotic used to select for stable mammalian cell lines. They are separated by the viral 2A sequence which allows for polycistronic expression of genes on the same mRNA molecule. The basic TREt system is depicted in Figure 1. | |
− | + | ||
− | + | ==Characterization== | |
− | + | ||
+ | [[Image:Tret_vs_egsh.jpg|thumb|left|Figure 1. Comparison of TREt and EGSH reporter constructs.]] '''Comparison of TREt and EGSH Promoter Constructs''' | ||
+ | |||
+ | In Figure 1, the inducibility of TREt and another inducible promoter, EGSH (Link:[https://parts.igem.org/Part:BBa_K415507]), are compared. HEK293 FT cells were infected with reporter constructs for each system. The EGSH system is inducible with ponasterone, and expresses EGFP when induced. The TREt system controls expression of EYFP. Addition of DOX leads to activation of rtTA3, which then induces TREt_EYFP. Controls without inducing chemical factors are shown for both systems. For the EGSH system, (A) indicates the absence and (B) indicates the presence of ponesterone. For the TREt system, (C) indicate the absence and (D) indicates the presence of DOX. Scale bars (red) are 100 μm. | ||
+ | |||
+ | '''Results''' | ||
+ | |||
+ | Negative control experienced very low level of basal transcription, or "leaky" expression. DOX addition led to dramatic increase in transcriptional activity. This makes the TREt system ideal for inducible, high level expression of proteins, especially lethal or harmful proteins that must be tightly regulated. The TREt system is also widely used in synthetic systems for its rigorous positive feedback loop. | ||
+ | |||
+ | See also: TREt promoter [https://parts.igem.org/wiki/index.php?title=Part:BBa_K415506]. | ||
+ | |||
+ | ==Sequence and Features== | ||
<partinfo>BBa_K415504 SequenceAndFeatures</partinfo> | <partinfo>BBa_K415504 SequenceAndFeatures</partinfo> | ||
Revision as of 03:55, 29 October 2010
Rtta3_2a_Hygro L1L2 MammoBlock Entry Vector
L1L2 Mammoblock entry vector containing the Rtta3_2a_hygro construct. rtTA3 is a DOX-inducible transcription factor controlling expression of the TRE promoter; Hygro is a selection marker against the Hygromycin antibiotic used to select for stable mammalian cell lines. They are separated by the viral 2A sequence which allows for polycistronic expression of genes on the same mRNA molecule. The basic TREt system is depicted in Figure 1.
Characterization
Comparison of TREt and EGSH Promoter ConstructsIn Figure 1, the inducibility of TREt and another inducible promoter, EGSH (Link:[1]), are compared. HEK293 FT cells were infected with reporter constructs for each system. The EGSH system is inducible with ponasterone, and expresses EGFP when induced. The TREt system controls expression of EYFP. Addition of DOX leads to activation of rtTA3, which then induces TREt_EYFP. Controls without inducing chemical factors are shown for both systems. For the EGSH system, (A) indicates the absence and (B) indicates the presence of ponesterone. For the TREt system, (C) indicate the absence and (D) indicates the presence of DOX. Scale bars (red) are 100 μm.
Results
Negative control experienced very low level of basal transcription, or "leaky" expression. DOX addition led to dramatic increase in transcriptional activity. This makes the TREt system ideal for inducible, high level expression of proteins, especially lethal or harmful proteins that must be tightly regulated. The TREt system is also widely used in synthetic systems for its rigorous positive feedback loop.
See also: TREt promoter [2].
Sequence and Features
- 10INCOMPATIBLE WITH RFC[10]Illegal EcoRI site found at 6
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Illegal EcoRI site found at 2178
Illegal XbaI site found at 30
Illegal PstI site found at 1462 - 12INCOMPATIBLE WITH RFC[12]Illegal EcoRI site found at 6
Illegal EcoRI site found at 322
Illegal EcoRI site found at 1372
Illegal EcoRI site found at 2178
Illegal PstI site found at 1462
Illegal NotI site found at 2170 - 21INCOMPATIBLE WITH RFC[21]Illegal EcoRI site found at 6
Illegal EcoRI site found at 322
Illegal EcoRI site found at 1372
Illegal EcoRI site found at 2178
Illegal BamHI site found at 339 - 23INCOMPATIBLE WITH RFC[23]Illegal EcoRI site found at 6
Illegal EcoRI site found at 322
Illegal EcoRI site found at 1372
Illegal EcoRI site found at 2178
Illegal XbaI site found at 30
Illegal PstI site found at 1462 - 25INCOMPATIBLE WITH RFC[25]Illegal EcoRI site found at 6
Illegal EcoRI site found at 322
Illegal EcoRI site found at 1372
Illegal EcoRI site found at 2178
Illegal XbaI site found at 30
Illegal PstI site found at 1462
Illegal AgeI site found at 351 - 1000COMPATIBLE WITH RFC[1000]