Difference between revisions of "Part:BBa K404213"
(→‎Usage and Biology)
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<span class='h3bb'>Sequence and Features</span>
 
<span class='h3bb'>Sequence and Features</span>
 
<partinfo>BBa_K404213 SequenceAndFeatures</partinfo>
 
<partinfo>BBa_K404213 SequenceAndFeatures</partinfo>
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<table border="1" style="float:right; width:480px; height:auto;>
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<tr>
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  <th><b>Restriction site</b></th>
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  <th><b>Enzyme</b></th>
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  <th><b>Recognition sequence</b></th>
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  <th><b>Activity</b></th>
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  <th><b>Temp.</b></th>
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</tr>
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<tr>
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  <td>upstream 587</td>
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  <td>[http://www.neb.com/nebecomm/products/productR3136.asp BamHI-HF]</td>
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  <td>[[image:Freiburg10_recognition site BamHI-HF.Gif]]</td>
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  <td>100;50;10;100</td>
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  <td>37°C</td>
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</tr>
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<tr>
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  <td>downstream 587</td>
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  <td>[http://www.neb.com/nebecomm/products/productR3151.asp PvuII-HF]</td>
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  <td>[[image:Freiburg10_recognition site PvuII-HF.Gif]]</td>
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  <td>0;25;0;100</td>
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  <td>37°C
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</tr>
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<tr>
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</table>
  
  

Revision as of 15:56, 26 October 2010

ViralBrick-587KO-Z34C
The Z34C antibody binding motif including a knockout of the natural HSPG tropism, ready for insertion into the 587 loop

Freiburg10 ViralBrick-logo-587KO-Z34C.png


Usage and Biology

The Z34C antibody binding motif is a 34 amino acids long fragment from the a minimized fragment of the Z Domain of [http://www.ncbi.nlm.nih.gov/protein/153106 Staphylococcal Protein A]. It specifically binds to the Fc-Domain of antibodies. If inserted into AAV capsids, it can bind antibodies against a specific antigen, allowing differential targeting without the need for further genetic engineering.

Freiburg10 ViralBrick motif Z34C.png

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 10
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]
Restriction site Enzyme Recognition sequence Activity Temp.
upstream 587 [http://www.neb.com/nebecomm/products/productR3136.asp BamHI-HF] Freiburg10 recognition site BamHI-HF.Gif 100;50;10;100 37°C
downstream 587 [http://www.neb.com/nebecomm/products/productR3151.asp PvuII-HF] Freiburg10 recognition site PvuII-HF.Gif 0;25;0;100 37°C