Difference between revisions of "Part:BBa K5246020"

 
Line 3: Line 3:
 
<partinfo>BBa_K5246020 short</partinfo>
 
<partinfo>BBa_K5246020 short</partinfo>
  
−
The polysaccharide deacetylase HfsH is required for H. baltica adhesion Holdfast polysaccharides in H. baltica DhfsH lack cohesive and adhesive properties.
+
===Introduction===
 +
 
 +
 
 +
===Usage and Biology===
 +
The polysaccharide deacetylase HfsH is required for H. baltica adhesion. Holdfast polysaccharides in H. baltica HfsH mutants lack cohesive and adhesive properties.
 
Research instigating Hirschia baltica genome, found that hfsH is in the hfs locus while hfsK and its paralogs are found outside the hfs locus. Colour coding corresponds to homologs and paralogs. Hash marks indicate genes that are found in a different location in the genome. [1]
 
Research instigating Hirschia baltica genome, found that hfsH is in the hfs locus while hfsK and its paralogs are found outside the hfs locus. Colour coding corresponds to homologs and paralogs. Hash marks indicate genes that are found in a different location in the genome. [1]
 
HfsH expression correlates positively with holdfast binding in high ionic strength. HfsH is an important factor for adherence in high ionic-strength environments, adhesion and biofilm formation. It is also crucial for retention of holdfast thiols and galactose monosaccharides. [1]
 
HfsH expression correlates positively with holdfast binding in high ionic strength. HfsH is an important factor for adherence in high ionic-strength environments, adhesion and biofilm formation. It is also crucial for retention of holdfast thiols and galactose monosaccharides. [1]
  
−
<!-- Add more about the biology of this part here
+
===Sequence and Features===
−
===Usage and Biology===
+
−
 
+
−
<!-- -->
+
−
<span class='h3bb'>Sequence and Features</span>
+
 
<partinfo>BBa_K5246020 SequenceAndFeatures</partinfo>
 
<partinfo>BBa_K5246020 SequenceAndFeatures</partinfo>
  
  
−
<!-- Uncomment this to enable Functional Parameter display
 
 
===Functional Parameters===
 
===Functional Parameters===
 
<partinfo>BBa_K5246020 parameters</partinfo>
 
<partinfo>BBa_K5246020 parameters</partinfo>
−
<!-- -->
+
 
 +
===Experimental characterization===
 +
 
 +
 
 +
===References===

Revision as of 08:05, 22 September 2024


HB HfsH Deacetylase

Introduction

Usage and Biology

The polysaccharide deacetylase HfsH is required for H. baltica adhesion. Holdfast polysaccharides in H. baltica HfsH mutants lack cohesive and adhesive properties. Research instigating Hirschia baltica genome, found that hfsH is in the hfs locus while hfsK and its paralogs are found outside the hfs locus. Colour coding corresponds to homologs and paralogs. Hash marks indicate genes that are found in a different location in the genome. [1] HfsH expression correlates positively with holdfast binding in high ionic strength. HfsH is an important factor for adherence in high ionic-strength environments, adhesion and biofilm formation. It is also crucial for retention of holdfast thiols and galactose monosaccharides. [1]

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 385
  • 1000
    COMPATIBLE WITH RFC[1000]


Functional Parameters

Experimental characterization

References