Difference between revisions of "Part:BBa K5492720:Design"

(→‎Design Notes)
(→‎Design Notes)
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[https://parts.igem.org/Part:BBa_K5492710 Y1 ssDNA aptamer] sequence designed to specifically bind to histamine.
 
[https://parts.igem.org/Part:BBa_K5492710 Y1 ssDNA aptamer] sequence designed to specifically bind to histamine.
 
The sequence contains a fluorophore molecule at its 5' end.
 
The sequence contains a fluorophore molecule at its 5' end.
−
[https://parts.igem.org/Part:BBa_K5492730 y1_reverse_compliment_strand] is complementary to this sequnce, which acts as a quencher to flurophore until the aptamer binds histamine.
+
[https://parts.igem.org/Part:BBa_K5492730 y1_reverse_compliment_strand] is complementary to this sequnce, which contains a quencher molecule which absorbs the light emitted by flurophore until the aptamer binds histamine.
  
 
===Source===
 
===Source===

Revision as of 10:25, 19 September 2024


Y1_aptamer_with_fluorophore


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


Design Notes

Y1 ssDNA aptamer sequence designed to specifically bind to histamine. The sequence contains a fluorophore molecule at its 5' end. y1_reverse_compliment_strand is complementary to this sequnce, which contains a quencher molecule which absorbs the light emitted by flurophore until the aptamer binds histamine.

Source

https://www.nature.com/articles/s41598-019-52876-1 Reference: Wu, C.; Xiong, M.; Zhou, J.; Jiang, H.; Liu, X. Development of a DNA Aptamer-Based Biosensor for Detection of Mercury Ions Using Fluorescence Resonance Energy Transfer. Sci. Rep. 2019, 9, 16885. DOI: 10.1038/s41598-019-52876-1.

References

Reference: Wu, C.; Xiong, M.; Zhou, J.; Jiang, H.; Liu, X. Development of a DNA Aptamer-Based Biosensor for Detection of Mercury Ions Using Fluorescence Resonance Energy Transfer. Sci. Rep. 2019, 9, 16885. DOI: 10.1038/s41598-019-52876-1.