Difference between revisions of "Part:BBa K4613216"

Revision as of 11:08, 11 October 2023

traI

The tra system in Agrobacterium tumefaciens is a LuxR/LuxI-type quorum sensing system. TraI protein facilitates the formation of ligand 3-oxo-C8-HSL(3OC8), and TraR, when bound to 3OC8, becomes active and combines to P_tra, increasing its transcription efficiency.

Reference

Fuqua C, Winans S C.Conserved cis-acting promoter elements are required for density-dependent transcription of Agrobacterium tumefaciens conjugal transfer genes[J].J Bacteriol,1996, 178 (2): 435-40.
White C E, Winans S C.The quorum-sensing transcription factor TraR decodes its DNA binding site by direct contacts with DNA bases and by detection of DNA flexibility[J].Mol Microbiol,2007, 64 (1): 245-56.

Sequence and Features

Assembly Compatibility:

10
COMPATIBLE WITH RFC[10]
12
COMPATIBLE WITH RFC[12]
21
COMPATIBLE WITH RFC[21]
23
COMPATIBLE WITH RFC[23]
25
INCOMPATIBLE WITH RFC[25]
Illegal NgoMIV site found at 401
1000
COMPATIBLE WITH RFC[1000]

@@ Line 4: / Line 4: @@
 The tra system in <em>Agrobacterium tumefaciens</em> is a <em>LuxR/LuxI</em>-type quorum sensing system.
-TraI protein facilitates the formation of ligand 3-oxo-C8-HSL(3OC8), and TraR, when bound to 3OC8, becomes active and combines to <em>Ptra</em>, increasing its transcription efficiency.
+TraI protein facilitates the formation of ligand 3-oxo-C8-HSL(3OC8), and TraR, when bound to 3OC8, becomes active and combines to <em>P<sub>tra</sub></em>, increasing its transcription efficiency.
 ==== Reference ====