Difference between revisions of "Part:BBa K4743034"
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<span class='h3bb'><big>'''Overall metabolic pathway of Astaxanthin'''</big></span> | <span class='h3bb'><big>'''Overall metabolic pathway of Astaxanthin'''</big></span> | ||
− | <html><img style="width:800px" src="https://static.igem.wiki/teams/4743/wiki/folder-for-parts/astaxanthin- | + | <html><img style="width:800px" src="https://static.igem.wiki/teams/4743/wiki/folder-for-parts/astaxanthin-production-pathway.png" </html> |
<center>Figure 1. The Matabolic pathway of Astaxanthin production.</center> | <center>Figure 1. The Matabolic pathway of Astaxanthin production.</center> |
Latest revision as of 15:21, 10 October 2023
Astaxanthin production set
The engineered Kluyveromyces marxianus exhibits a red coloration as a result of successful genetic modification, indicating the accumulation of astaxanthin within the cells. This color change serves as a visual confirmation of the genetic engineering success. Yeast cells reproduce through a process known as budding, wherein some newly formed buds may still be attached to the parent cell. While these buds may lack the desired genes, they can survive the antibiotic selection process due to the antibiotic resistance conferred by the engineered parent cell. It was observed that the cell sizes within the culture vary, and not all of them display the red coloration, suggesting that not all cells in the culture contain the desired genes.
To address this variation and further refine the culture, a three-generation streak selection method was employed, taking advantage of the easily observable red phenotype in the engineered Kluyveromyces marxianus.
Overall metabolic pathway of Astaxanthin
Phenotyping
Quantitative check
References
1.Jin, J., Wang, Y., Yao, M., Gu, X., Li, B., Liu, H., Ding, M., Xiao, W., & Yuan, Y. (2018). Astaxanthin overproduction in yeast by strain engineering and new gene target uncovering. Biotechnology for biofuels, 11, 230. https://doi.org/10.1186/s13068-018-1227-4
2.Chang, J. J., Ho, C. Y., Ho, F. J., Tsai, T. Y., Ke, H. M., Wang, C. H., Chen, H. L., Shih, M. C., Huang, C. C., & Li, W. H. (2012). PGASO: A synthetic biology tool for engineering a cellulolytic yeast. Biotechnology for biofuels, 5(1), 53. https://doi.org/10.1186/1754-6834-5-53
Sequence and Features
- 10INCOMPATIBLE WITH RFC[10]Illegal EcoRI site found at 8176
Illegal PstI site found at 8266 - 12INCOMPATIBLE WITH RFC[12]Illegal EcoRI site found at 8176
Illegal NheI site found at 627
Illegal NheI site found at 915
Illegal NheI site found at 1119
Illegal NheI site found at 2274
Illegal NheI site found at 9773
Illegal NheI site found at 10061
Illegal NheI site found at 10265
Illegal PstI site found at 8266 - 21INCOMPATIBLE WITH RFC[21]Illegal EcoRI site found at 8176
Illegal BglII site found at 725
Illegal BglII site found at 5611
Illegal BglII site found at 9871 - 23INCOMPATIBLE WITH RFC[23]Illegal EcoRI site found at 8176
Illegal PstI site found at 8266 - 25INCOMPATIBLE WITH RFC[25]Illegal EcoRI site found at 8176
Illegal PstI site found at 8266 - 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI.rc site found at 4377
Illegal BsaI.rc site found at 12941