Difference between revisions of "Part:BBa K4765119"

Line 10: Line 10:
 
===Usage and Biology===
 
===Usage and Biology===
 
This composite part is an easy and effective tool to select the fit ribozyme and stem-loop.
 
This composite part is an easy and effective tool to select the fit ribozyme and stem-loop.
===characterization===
+
===Characterization===
  
  

Revision as of 16:37, 1 October 2023


ribozyme test: constitutive expression

contributed by Fudan iGEM 2023

Introduction

This composite part is utilized to assess the cleavage efficiency of Twister P1 and stem-loop’s ability of preventing mRNA degradation. It is regulated by constitutive promoter and terminator. From its upstream to understream includes StayGold, stem-loop, Twister P1 and mScarlet. A ribozyme is proved to have cleavage ability when green and red fluorescence are emitted at the same time. We can assess the cleavage efficiency of ribozyme based on the ratio of red-green fluorescence intensity when the stem-loop is unchanged. We can also assess stem-loop’s ability of preventing mRNA degradation based on the ratio of red-green fluorescence intensity when the ribozyme is unchanged.

Usage and Biology

This composite part is an easy and effective tool to select the fit ribozyme and stem-loop.

Characterization

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 7
    Illegal NheI site found at 30
    Illegal NotI site found at 1399
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 690
    Illegal BsaI.rc site found at 710