Difference between revisions of "Part:BBa K4365006"
Svetlana ia (Talk | contribs) |
Svetlana ia (Talk | contribs) |
||
| Line 5: | Line 5: | ||
| − | {| class="wikitable" style="margin-left: auto; margin-right: auto; border: none; width: | + | {| class="wikitable" style="margin-left: auto; margin-right: auto; border: none; width:600px;" |
|+ Collection of fungal signal peptides | |+ Collection of fungal signal peptides | ||
|- | |- | ||
Revision as of 07:58, 11 October 2022
Signal peptide of MPGI from Magnaporthe grisea
MPGI is a highly secreted protein found in Magnaporthe grisea. It belongs to a protein family called hydrophobins. A signal peptide from such proteins should increase the secretion of a protein of interest in yeast if the signal peptide signal is placed before it.
| ID | Source | Species | Prediction coefficient [1] | |
|---|---|---|---|---|
| sp1 | BBa_K4365006 | MPGI | Magnaporthe grisea | 0.9562 |
| sp2 | BBa_K4365007 | RodA | Aspergillus nidulans | 0.9553 |
| sp3 | BBa_K4365008 | HYPI | Aspergillus fumigatus | 0.9703 |
| sp4 | BBa_K4365009 | SsgA | Metarhizium anisopliae | 0.9126 |
| sp5 | BBa_K4365010 | HCF-4 | Cladosporium fulvum | 0.9126 |
| sp6 | BBa_K4365025 | HCF-5 | Cladosporium fulvum | 0.9234 |
| sp7 | BBa_K4365026 | CCG-2 | Neurospora crassa | 0.9566 |
| sp8 | BBa_K4365011 | HCF-1 | Cladosporium fulvum | 0.6850 |
| sp9 | BBa_K4365027 | HCF-2 | Cladosporium fulvum | 0.8144 |
| sp10 | BBa_K4365012 | HCF-3 | Cladosporium fulvum | 0.7934 |
| sp11 | BBa_K4365013 | SC3 | Schizophyllum commune | 0.6327 |
| sp12 | BBa_K4365014 | ABH3 | Agaricus bisporus | 0.9458 |
| sp13 | BBa_K4365028 | COH1 | Coprinus cinereus | 0.8545 |
| sp14 | BBa_K4365015 | FBH1 | Pleurotus ostreatus | 0.3367 |
| sp15 | BBa_K4365016 | Aa-PRI2 | Agrocybe aegerita | 0.6356 |
| sp16 | BBa_K4365033 | Hyd-Pt1 | Pisolithus tinctorius | 0.8352 |
| sp17 | BBa_K4365017 | HFBI | Trichoderma reesei | 0.9851 |
| sp18 | BBa_K4365018 | HFBII | Trichoderma reesei | 0.6862 |
| sp19 | BBa_K4365019 | α-mating factor | Saccharomyces cerevisiae | 0.9988 |
- ↑ José Juan Almagro Armenteros et al. (2019) SignalP 5.0 improves signal peptide predictions using deep neural networks Nature Biotechnology, 37, 420-423, doi: 10.1038/s41587-019-0036-z
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]