Difference between revisions of "Part:BBa K174000:Design"

(New page: 498 bp long sspB CDS is amplified by PCR with dangling end primers with EcoRI-NotI-XbaI restriction site at 5’ and SpeI at 3’ and inserted into a Biobrick compatible vector. The sequen...)
 
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                     (Clamp sequence - SpeI site - last 21 base from the Biobrick)
 
                     (Clamp sequence - SpeI site - last 21 base from the Biobrick)
  
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==Construction==
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Treat Plasmid part BBa_J04450 (pSB1AT3) and our construct with EcoRI and SpeI
 
[[Image:Newcastle_2009_sspB_1.png‎]]
 
[[Image:Newcastle_2009_sspB_1.png‎]]
  
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Ligation of the backbone and the sspB insert
 
[[Image:Newcastle_2009_sspB_2.png‎]]
 
[[Image:Newcastle_2009_sspB_2.png‎]]

Revision as of 19:04, 26 September 2009

498 bp long sspB CDS is amplified by PCR with dangling end primers with EcoRI-NotI-XbaI restriction site at 5’ and SpeI at 3’ and inserted into a Biobrick compatible vector. The sequence is taken from E. coli strain DH5 alpha. Genbank accession number for E. coli MG1655 strain is NC_000913.2

Forward primer used: GATCTG-GAATTCGCGGCCGCTTCTAG-ATGGATTTGTCACAGCTAAC

                    (Clamp sequence - Standard Biobrick prefix - first 20 base from the Biobrick)  

Reverse primer used: TGTGAC-ACTAGTA-TTACTTCACAACGCGTAATGC

                   (Clamp sequence - SpeI site - last 21 base from the Biobrick)

Construction

Treat Plasmid part BBa_J04450 (pSB1AT3) and our construct with EcoRI and SpeI Newcastle 2009 sspB 1.png

Ligation of the backbone and the sspB insert Newcastle 2009 sspB 2.png