Difference between revisions of "Part:BBa K4390001"
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|+ Loop Free-Energy Decomposition | |+ Loop Free-Energy Decomposition | ||
|- | |- | ||
− | ! | + | ! Structural element !! dG !! Information |
|- | |- | ||
− | | | + | | External loop || -0.86 || 15 ss bases & 1 closing helices |
|- | |- | ||
− | | | + | | Stack || -1.00 || External closing pair is a4-t25 |
|- | |- | ||
− | | | + | | Stack || -1.44 || External closing pair is a5-t24 |
|- | |- | ||
− | | | + | | Stack || -2.17 || External closing pair is c6-g23 |
|- | |- | ||
− | | | + | | Stack || -1.84 || External closing pair is g7-c22 |
|- | |- | ||
− | | | + | | Stack || -2.24 || External closing pair is g8-c21 |
|- | |- | ||
− | | | + | | Stack || -1.84 || External closing pair is c9-g20 |
|- | |- | ||
− | | | + | | Stack || -1.84 || External closing pair is c10-g19 |
|- | |- | ||
− | | | + | | Stack || -1.28 || External closing pair is c11-g18 |
|- | |- | ||
− | ! | + | ! Helix !! -13.65 !! 9 base pairs |
|- | |- | ||
− | | | + | | Hairpin loop || 3.00 || Closing pair is t12-a17 |
|} | |} | ||
Revision as of 14:16, 5 September 2022
L2U2H09 Terminator
L2U2H09 is a synthetic terminator. The origin is https://www.addgene.org/127042/
Structural element | dG | Information |
---|---|---|
External loop | -0.86 | 15 ss bases & 1 closing helices |
Stack | -1.00 | External closing pair is a4-t25 |
Stack | -1.44 | External closing pair is a5-t24 |
Stack | -2.17 | External closing pair is c6-g23 |
Stack | -1.84 | External closing pair is g7-c22 |
Stack | -2.24 | External closing pair is g8-c21 |
Stack | -1.84 | External closing pair is c9-g20 |
Stack | -1.84 | External closing pair is c10-g19 |
Stack | -1.28 | External closing pair is c11-g18 |
Helix | -13.65 | 9 base pairs |
Hairpin loop | 3.00 | Closing pair is t12-a17 |
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]