Difference between revisions of "Part:BBa K3726070:Design"

 
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===Design Notes===
 
===Design Notes===
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The part is a MoClo Lv.1 part, assembled in the acceptor Lv1 entry vector “BBa_K3228069” P1_pANs_SpecR, which is a self replicating shuttle vector.
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This part has been assembled following the marburg collection standard, then the transcriptional unit is flanked by two connectors that will allow  the assembly of a Lv2 construct. In its upstream region the connector is 5'Con2 K2560066, and in its downstream region 3'Con2 K2560071
  
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This design will allow us to test which “tolerance and secretion ” variant has better efficiency by its own account as a replicative vector, and then assemble them as an integrative Lv2 Moclo construct. To know more about this, visit our webpage: https://2021.igem.org/Team:MADRID_UCM/Design
  
 
===Source===
 
===Source===
  
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This construct has been made by golden gate reaction.  
  
 
===References===
 
===References===
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"Enhancing Tolerance to Short-Chain Alcohols by Engineering the Escherichia coli AcrB Efflux Pump to Secrete the Non-native Substrate n-Butanol", ACS Publications, 2021. [Online]. Available: https://pubs.acs.org/doi/10.1021/sb400065q.

Revision as of 02:07, 20 October 2021


Lv.1 AcrbV2 - A


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal PstI site found at 2033
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 1634
    Illegal NheI site found at 1762
    Illegal PstI site found at 2033
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 1573
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal PstI site found at 2033
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal PstI site found at 2033
    Illegal NgoMIV site found at 3169
    Illegal NgoMIV site found at 4685
    Illegal AgeI site found at 109
    Illegal AgeI site found at 1408
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal SapI site found at 1390


Design Notes

The part is a MoClo Lv.1 part, assembled in the acceptor Lv1 entry vector “BBa_K3228069” P1_pANs_SpecR, which is a self replicating shuttle vector. This part has been assembled following the marburg collection standard, then the transcriptional unit is flanked by two connectors that will allow the assembly of a Lv2 construct. In its upstream region the connector is 5'Con2 K2560066, and in its downstream region 3'Con2 K2560071

This design will allow us to test which “tolerance and secretion ” variant has better efficiency by its own account as a replicative vector, and then assemble them as an integrative Lv2 Moclo construct. To know more about this, visit our webpage: https://2021.igem.org/Team:MADRID_UCM/Design

Source

This construct has been made by golden gate reaction.

References

"Enhancing Tolerance to Short-Chain Alcohols by Engineering the Escherichia coli AcrB Efflux Pump to Secrete the Non-native Substrate n-Butanol", ACS Publications, 2021. [Online]. Available: https://pubs.acs.org/doi/10.1021/sb400065q.