Difference between revisions of "Part:BBa K3739117"
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− | === | + | ===Biology=== |
+ | ===Usage=== | ||
+ | |||
+ | ===Characterization=== | ||
+ | Based on functions validation of the toxic protein BlrA and blue light-induced system EL222 independently, blue light-induced circuits (''pBlind-EL222-pBlind-blrA-GFP and J23106-EL222-pBlind-blrA-GFP'') were further studied to verify the function of these two circuits. Positive colonies were selected by kanamycin preliminarily and then verified by regular PCR (Fig. 1) and sequencing. | ||
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+ | '''Fig. 1.''' The result of regular PCR. Plasmid pET-28a(+). <partinfo>BBa_K3739066</partinfo> (left) and <partinfo>BBa_K3739117</partinfo> (right) | ||
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+ | In order to simulate the possible leakage of engineering bacteria in actual condition and study the effectiveness of blue light strips in water outlet of cooling water circulation system in nuclear power plant, we designed a series of experiments to study the working state of the kill switch. The constructed genetic circuit was transformed into ''Vibrio natriegens'' through electroporation and was cultured in a dark environment throughout the whole process. After being cultured for 5.5 h in the shaker at 37 °C, samples were taken and gradient diluted to 10-7 for spread plate when its OD600 reached 1.0. After dilution, the samples were spread on four plates, two cultured in the dark and two illustrated by blue light. | ||
+ | |||
+ | After being cultivated for 12 h, we compared the growth situation of two groups (dark vs. illustrated by blue light). As shown in Fig. 2, many colonies were macroscopic in the group with the dark condition, while none visible colonies were observed in the group illustrated by blue light, indicating the success of the kill switch system. | ||
+ | |||
+ | Fig. 2. Results of colonies culture under dark and illustrated by blue light. ''pBlind-EL222-pBlind-blrA-GFP'' (left), ''J23106-EL222-pBLind-GFP'' (right). | ||
+ | |||
+ | The process of engineering bacteria escaping from the working environment with a high concentration of bacteria to the natural environment with a low concentration of bacteria was simulated by lighting bacteria in the laboratory. Such an experimental scheme can verify the function of the combined circuit under the conditions close to the actual situation, that is, whether the engineered bacteria can be killed after being exposed to the blue light strips after leakage. According to the experimental results, the engineered bacteria can no longer produce progeny and form colonies illustrated by blue light, which proves that the kill switch system induced by blue light own an excellent performance. | ||
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Revision as of 20:31, 21 October 2021
K2332002-B0034-K2332004-K2332002-B0030-blrA-GFP
none
Biology
Usage
Characterization
Based on functions validation of the toxic protein BlrA and blue light-induced system EL222 independently, blue light-induced circuits (pBlind-EL222-pBlind-blrA-GFP and J23106-EL222-pBlind-blrA-GFP) were further studied to verify the function of these two circuits. Positive colonies were selected by kanamycin preliminarily and then verified by regular PCR (Fig. 1) and sequencing.
Fig. 1. The result of regular PCR. Plasmid pET-28a(+). BBa_K3739066 (left) and BBa_K3739117 (right)
In order to simulate the possible leakage of engineering bacteria in actual condition and study the effectiveness of blue light strips in water outlet of cooling water circulation system in nuclear power plant, we designed a series of experiments to study the working state of the kill switch. The constructed genetic circuit was transformed into Vibrio natriegens through electroporation and was cultured in a dark environment throughout the whole process. After being cultured for 5.5 h in the shaker at 37 °C, samples were taken and gradient diluted to 10-7 for spread plate when its OD600 reached 1.0. After dilution, the samples were spread on four plates, two cultured in the dark and two illustrated by blue light.
After being cultivated for 12 h, we compared the growth situation of two groups (dark vs. illustrated by blue light). As shown in Fig. 2, many colonies were macroscopic in the group with the dark condition, while none visible colonies were observed in the group illustrated by blue light, indicating the success of the kill switch system.
Fig. 2. Results of colonies culture under dark and illustrated by blue light. pBlind-EL222-pBlind-blrA-GFP (left), J23106-EL222-pBLind-GFP (right).
The process of engineering bacteria escaping from the working environment with a high concentration of bacteria to the natural environment with a low concentration of bacteria was simulated by lighting bacteria in the laboratory. Such an experimental scheme can verify the function of the combined circuit under the conditions close to the actual situation, that is, whether the engineered bacteria can be killed after being exposed to the blue light strips after leakage. According to the experimental results, the engineered bacteria can no longer produce progeny and form colonies illustrated by blue light, which proves that the kill switch system induced by blue light own an excellent performance.
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21INCOMPATIBLE WITH RFC[21]Illegal XhoI site found at 1250
- 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal NgoMIV site found at 160
Illegal AgeI site found at 385
Illegal AgeI site found at 1102 - 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI.rc site found at 1001
Illegal SapI site found at 1319
Illegal SapI.rc site found at 1682