Difference between revisions of "Part:BBa K3803016"
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For our own product yield, our production also improved after substituting our three-gene cassette for OUC_China's two-gene one. The improved production was very obvious after the parts improvement based on our HPLC results. | For our own product yield, our production also improved after substituting our three-gene cassette for OUC_China's two-gene one. The improved production was very obvious after the parts improvement based on our HPLC results. | ||
− | For more information about our parts and improvement, you can click here: https://2021.igem.org/Team:Jiangnan_China/ | + | For more information about our parts and improvement, you can click here: https://2021.igem.org/Team:Jiangnan_China/Improve |
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Revision as of 05:23, 19 October 2021
This is a efficient xylose utilization composite part.
Based on the parts (BBa_K2314913 & BBa_K2314324) from OUC_China in 2017 iGEM, we built a more efficient xylose utilization part BBa_K3803016. Xylose reductase (XR) will first transform xylose to xylitol, and xylitol dehydrogenase (XDH) can further convert xylitol to xylulose.Then, xylulose will be converted to xylulose 5-phosphate (X5P) by the native xylulose kinase (XK). Apart from the original XR and XDH genes, considering the low copy number of native XK gene in S. cerevisiae, we introduced an extra XK gene to improve the xylose utilization ability.
For cell growth, OUC_China achieved a final OD600 around 2.35 in YNB-based xylose media. After our improvement on their parts, we could get a final OD600 around 20.
For our own product yield, our production also improved after substituting our three-gene cassette for OUC_China's two-gene one. The improved production was very obvious after the parts improvement based on our HPLC results.
For more information about our parts and improvement, you can click here: https://2021.igem.org/Team:Jiangnan_China/Improve
Sequence and Features
- 10INCOMPATIBLE WITH RFC[10]Illegal EcoRI site found at 805
Illegal XbaI site found at 6464
Illegal PstI site found at 2114 - 12INCOMPATIBLE WITH RFC[12]Illegal EcoRI site found at 805
Illegal PstI site found at 2114 - 21INCOMPATIBLE WITH RFC[21]Illegal EcoRI site found at 805
Illegal BglII site found at 1265 - 23INCOMPATIBLE WITH RFC[23]Illegal EcoRI site found at 805
Illegal XbaI site found at 6464
Illegal PstI site found at 2114 - 25INCOMPATIBLE WITH RFC[25]Illegal EcoRI site found at 805
Illegal XbaI site found at 6464
Illegal PstI site found at 2114
Illegal AgeI site found at 1936 - 1000COMPATIBLE WITH RFC[1000]