Difference between revisions of "Part:BBa K4035002:Design"
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===Source=== | ===Source=== | ||
| − | The CUP1 sequence is the genomic sequence of the copper metallotionein 1 protein. After having linked two copies with a linker in between, the full sequence was codon optimized by the software of the company that synthetized the sequence in order to avoid loops during syntethis. The CUP1-linker-CUP1 sequence was then inserted by Gibson Assembly in the pCTcon2_V5 plasmid containing Aga2, V5 tag and the Gal1 promoter. | + | The CUP1 sequence is the genomic sequence of the copper metallotionein 1 protein. The linker sequence is the reverse transcription of the GGGGS amino acid sequence. After having linked two copies with a linker in between, the full sequence was codon optimized by the software of the company that synthetized the sequence in order to avoid loops during syntethis. The CUP1-linker-CUP1 sequence was then inserted by Gibson Assembly in the pCTcon2_V5 plasmid containing Aga2, V5 tag and the Gal1 promoter. |
===References=== | ===References=== | ||
(1) Chao, G.; Lau, W. L.; Hackel, B. J.; Sazinsky, S. L.; Lippow, S. M.; Wittrup, K. D. Isolating and Engineering Human Antibodies Using Yeast Surface Display. Nat Protoc 2006, 1 (2), 755–768. https://doi.org/10.1038/nprot.2006.94. | (1) Chao, G.; Lau, W. L.; Hackel, B. J.; Sazinsky, S. L.; Lippow, S. M.; Wittrup, K. D. Isolating and Engineering Human Antibodies Using Yeast Surface Display. Nat Protoc 2006, 1 (2), 755–768. https://doi.org/10.1038/nprot.2006.94. | ||
Revision as of 05:20, 13 September 2021
Dimerization of the copper metallothionein 1 : CUP1-(GGGGS)3-CUP1
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21INCOMPATIBLE WITH RFC[21]Illegal BamHI site found at 190
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]
Design Notes
The start and stop codon of the CUP1 genomic sequences were removed in order to fuse the proteins together with the linker.
Source
The CUP1 sequence is the genomic sequence of the copper metallotionein 1 protein. The linker sequence is the reverse transcription of the GGGGS amino acid sequence. After having linked two copies with a linker in between, the full sequence was codon optimized by the software of the company that synthetized the sequence in order to avoid loops during syntethis. The CUP1-linker-CUP1 sequence was then inserted by Gibson Assembly in the pCTcon2_V5 plasmid containing Aga2, V5 tag and the Gal1 promoter.
References
(1) Chao, G.; Lau, W. L.; Hackel, B. J.; Sazinsky, S. L.; Lippow, S. M.; Wittrup, K. D. Isolating and Engineering Human Antibodies Using Yeast Surface Display. Nat Protoc 2006, 1 (2), 755–768. https://doi.org/10.1038/nprot.2006.94.