Difference between revisions of "Part:BBa K3335000"

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==Contribution: NJU-China 2020==
 
==Contribution: NJU-China 2020==
<p>This year we want to use liver cells as a concept to treat lung cancer by overexpressing exosomes containing siRNA.</p>
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<p>As previously reported, CMV-hSDC4-STEAP3-NadB can strongly promote exosome release. To develop the more efficient booster part for our strategy, we designed another two parts (CMV-KIBRA and CMV-nSMase2) to find out the most efficient design for our project. We tested all the three designs <i>in vitro</i>. The expression of each mRNA was confirmed by RT-qPCR after transfected to HEK293T cells.</p>
<p>In our interview with the professor, we learned that exosome production is likely to be inefficient, so we found the KIBRA protein.KIBRA as an adaptor - like protein that stabilizes Rab27a, which in turn controls exosome secretion.</p>
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[[File:T--NJU-China--50001.png|500px|thumb|center|Figure 1. KIBRA, NadB, nSMase2 mRNA relative expression in HEK293T cell (vs GADPH)]]
  
https://2020.igem.org/wiki/images/4/4f/T--NJU-China--1.png
 
<p>Figure1.KIBRA mRNA overexpression in HEK293T</p>
 
  
 
===KIBRA protein overexpressed in HEK293T===
 
===KIBRA protein overexpressed in HEK293T===
<p>Western Blotting showed that KIBRA was overexpressed in HEK293T cells. We will further use it to verify the efficiency of promoting exosome release.</p>
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[[File:T--NJU-China--15.png|500px]]
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<span class='h3bb'>Sequence and Features</span>
 
<span class='h3bb'>Sequence and Features</span>
 
<partinfo>BBa_K3335000 SequenceAndFeatures</partinfo>
 
<partinfo>BBa_K3335000 SequenceAndFeatures</partinfo>

Revision as of 13:00, 27 October 2020


We use KIBRA to control exosome secretion

KIBRA as an adaptor-like protein that stabilizes Rab27a, which in turn controls exosome secretion. Rab27a is stabilized by interacting with KIBRA, which prevents ubiquitination and degradation via the ubiquitin-proteasome pathway. KIBRA controls exosome secretion via inhibiting the proteasomal degradation of Rab27a[1].

In our experiment, we used KIBRA to promote cell release of exosomes containing siRNA, thus increasing the efficiency of cell production and release of exosomes and improving the killing of tumor cells.

[1]Lin Song et al,.KIBRA controls exosome secretion via inhibiting the proteasomal degradation of Rab27a.Nature Communication,2019.

Usage and Biology

Functional Parameters

Contribution: NJU-China 2020

As previously reported, CMV-hSDC4-STEAP3-NadB can strongly promote exosome release. To develop the more efficient booster part for our strategy, we designed another two parts (CMV-KIBRA and CMV-nSMase2) to find out the most efficient design for our project. We tested all the three designs in vitro. The expression of each mRNA was confirmed by RT-qPCR after transfected to HEK293T cells.

Figure 1. KIBRA, NadB, nSMase2 mRNA relative expression in HEK293T cell (vs GADPH)


KIBRA protein overexpressed in HEK293T

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 335
    Illegal BglII site found at 2999
    Illegal BamHI site found at 246
    Illegal BamHI site found at 442
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 435
    Illegal BsaI site found at 2598
    Illegal BsaI.rc site found at 1920
    Illegal BsaI.rc site found at 2644