Revision as of 07:08, 22 October 2020

AnGlu Starch degradation

EXP, AnGlu, XPR2t part will be digested by BsaI and then assembled as the module 1 through the T4 ligase. The module 1 and Leu selection marker will be digested by SapI and then assembled as “EXP-AnGlu-XPR2t-Leu” expression cassette through the T4 ligase. The cassette can be transformed into the Yarrowia lipolytica plotoplast and integrated into the genome for AnGlu efficient expression.

Sequence and Features

Usage and Biology

Yarrowia lipolytica can use starch as sole carbon sources when the AnGlu is expressed successfully, which means the AnGlu has the ability to degrade the starch efficiently.

1.Plasmid Construction

We constructed the plasmids according to DESIGN page. There are four parts in our plasmid library: a promoter-EXP (BBa_K3578000), a terminator-XPR2t (BBa_K3578002), expression genes glucoamylase (BBa_K3578001), and the Leu selection marker (BBa_K3578004). By BsaI and SapI IIs enzymes digestion and T4 ligase, we successfully constructed the plasmids which separately carried the AnGlu expression cassette with Leu selection marker (Figure 1). Then plasmids were linearizd with EcoR I and transformed into Y. lipolytica plotoplast. The AnGlu expression cassette with Leu selection marker DNA fragment will be randomly integrated into genome loci.

Figure 1 Schematic diagram of plasmid construction process.

By the PCR experiment, we randomly selected 10 strains in which AnGlu and Leu expression cassette have been successfully integrated into the genome. We designed the primers(F/R) to identify the Anglu expression cassette. The primer design was shown in the figure 2, and the predicted PCR result is 2736 bp. The electrophoresis results showed that about 3000 bp bands were obtained by using Anglu expression cassette as template, the electrophoresis results were consistent with our expectation(Figure 2).

Figure 2 Primer design and agarose gel electrophoresis for plasmid identification.

2.The expression of AnGlu in Y. lipolytica is sufficient to allow growth on starch

In order to verify whether the AnGlu possess the ability for starch degradation. Engineered Y. lipolytica expressing the AnGlu (Polg-AnGlu) individually were cultured in the starch medium in which the 30 g/L starch was used as the sole carton source. In addition, the strain Po1g was also cultured in the starch medium with the addition of 0.4g/L leucine as the control (Polg-Leu). The OD was measured every 24 hours. As shown in Figure 3, Po1g-AnGlu strain can grow well in the starch medium, it means that AnGlu had the relatively higher starch utilization efficiency. The result can also be directly observed as shown in Figure 4, in which Polg-AnGlu possess a much higher cell density. In summary, the expression of AnGlu in Y. lipolytica is sufficient to allow growth on starch.

Figure 3 Growth curve in starch medium as sole carbon source.