Difference between revisions of "Part:BBa K3349004:Design"
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===Design Notes=== | ===Design Notes=== | ||
| − | The part was codon optimized for use in E. coli . The his tag was placed on the C-terminus of the GFP reporter. | + | The part was codon optimized for use in <i>E. coli</i>. The his tag was placed on the C-terminus of the GFP reporter. |
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===Source=== | ===Source=== | ||
Revision as of 15:11, 7 October 2020
Pectin Lyase PelB-GFP
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21INCOMPATIBLE WITH RFC[21]Illegal BglII site found at 261
Illegal BamHI site found at 1146 - 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]
Design Notes
The part was codon optimized for use in E. coli. The his tag was placed on the C-terminus of the GFP reporter.
Source
The pectase sequence was taken from the Uniprot server. The sequence ID from NCBI is WP_123064018.1. The GFP sequence was taken from uniprot as well (P42212)
References
1. Keggi, C and Doran-Peterson, J. (2020) The homogalacturonan deconstruction system of Paenibacillus amylolyticus 27C64 requires no extracellular Pectin Methylesterase and has significant industrial potential. Applied and environmental microbiology. 86, e02275-19.