Difference between revisions of "Part:BBa K3267001"
Line 22: | Line 22: | ||
===Improvement Upon BBa_K2862021=== | ===Improvement Upon BBa_K2862021=== | ||
+ | We made this electrochemical control of Bio-parts possible with simpler equipment and a more complicated pathway. 2018 Imperial College team used a commercial potentiostat, but we hand-made the electrodes connected to the simple power supply in the physics lab. | ||
+ | [[File:T--NYU_Shanghai--ResultsFig4.jpg|thumb|center|Figure 4: Electric Modulation On Agar Plate Setup]] | ||
+ | [[File:T--NYU_Shanghai--MethodsFig5.jpeg|thumb|center|Figure 5: Making Sure that the Electric Setup has 0.5 V]] | ||
<!-- --> | <!-- --> |
Revision as of 00:14, 22 October 2019
Quorum-Sensing Receiver Construct
Transformed cells with this construct respond to AHL-dependent quorum sensing and GFP would be expressed by the activated transcription factor protein LuxR which binds to the bidirectional promoter region (pLuxR/pLuxI).
Biology and Usage
This Receiver part contains the V. fischeri-intrinsic bidirectional promoter region, the LuxRS regulon. The high concentration of Acyl-homoserine lactose (AHL) binds to the LuxR protein to activate and it binds to pLuxR/pLuxS promoters. Instead of LuxS protein, we add super folder GFP in order to make this part as the reporter part of the whole system (Fig 1). The super folder GFP is followed by the PixCell degradation tag from the 2018 Imperial College team to analyze the reporter gene spatiotemporally.
Characterization
Two parts (Bioelectric Relay cell and QS Receiver cell) are separately transformed in E. coli. and mixed on the agar plate to cultured under electric stimulation. The GFP fluorescence level is determined by pixel intensities after a 1-hour electric shock followed by 24-hour post-culturing. There are three sets to show our model: Co-culture of both cells, only relay cell, and only receiver cell.
Quantitatively, only when both Relay and Receiver cell exists (Co-culture), GFP expression is enhanced. Only the Receiver cell has lightly more expression of GFP than only Relay cell (Fig 2). This should be due to the intrinsic LuxR proteins that facilitate the GFP expression only by its own plasmid. Qualitatively, we also observed the spatial expressing of quorum sensing as most of the GFP expressing cells are located on the side positive electric potential (Fig 3).
Improvement Upon BBa_K2862021
We made this electrochemical control of Bio-parts possible with simpler equipment and a more complicated pathway. 2018 Imperial College team used a commercial potentiostat, but we hand-made the electrodes connected to the simple power supply in the physics lab.
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal AgeI site found at 1015
- 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI.rc site found at 1661