Difference between revisions of "Part:BBa K3286230"
| Line 3: | Line 3: | ||
<partinfo>BBa_K3286230 short</partinfo> | <partinfo>BBa_K3286230 short</partinfo> | ||
| − | This DNA sequence is recognized by the LAMP primers used most commonly for detection of Xylella fastidiosa, as published in the paper "Development of LAMP and real-time PCR methods for the rapid detection of Xylella fastidiosa for quarantine and field applications." by Harper et al. 2010. | + | This DNA sequence is recognized by the LAMP primers used most commonly for detection of Xylella fastidiosa, as published in the paper "Development of LAMP and real-time PCR methods for the rapid detection of Xylella fastidiosa for quarantine and field applications." by Harper et al. 2010. If one transforms it into a bacterium, this bacterium can be used as a model organism for the detection of X. fastidiosa by LAMP. |
It consists of bases 72-444 of the RimM gene as published on: https://www.genome.jp/dbget-bin/www_bget?xfa:XF_0108 | It consists of bases 72-444 of the RimM gene as published on: https://www.genome.jp/dbget-bin/www_bget?xfa:XF_0108 | ||
Revision as of 16:09, 19 October 2019
LAMP detection site for Xylella fastidiosa (part of RimM gene)
This DNA sequence is recognized by the LAMP primers used most commonly for detection of Xylella fastidiosa, as published in the paper "Development of LAMP and real-time PCR methods for the rapid detection of Xylella fastidiosa for quarantine and field applications." by Harper et al. 2010. If one transforms it into a bacterium, this bacterium can be used as a model organism for the detection of X. fastidiosa by LAMP.
It consists of bases 72-444 of the RimM gene as published on: https://www.genome.jp/dbget-bin/www_bget?xfa:XF_0108
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]