Difference between revisions of "Part:BBa K3239002"

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The MIT1 promoter is homogenous to the P. pastoris GS115 strain. It is upregulated by the Prm1 protein, a transcription factor homogenous to the P. pastoris GS115 strain.
 
The MIT1 promoter is homogenous to the P. pastoris GS115 strain. It is upregulated by the Prm1 protein, a transcription factor homogenous to the P. pastoris GS115 strain.
  
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===Reference===
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Liang, S., Wang, B., Pan, L., Ye, Y., He, M., Han, S., … Lin, Y. (2012). Comprehensive structural annotation of Pichia pastoris transcriptome and the response to various carbon sources using deep paired-end RNA sequencing. BMC Genomics, 13(1). https://doi.org/10.1186/1471-2164-13-738
  
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Shi, L., Wang, J., Wang, X., Zhang, Y., Song, Z., Cai, M., & Zhou, X. (2019). Transcriptome and metabolome analyses reveal global behaviour of a genetically engineered methanol-independent Pichia pastoris strain. Process Biochemistry, 76(August 2018), 46–54. https://doi.org/10.1016/j.procbio.2018.10.014
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Wang, X., Wang, Q., Wang, J., Zhou, M., Shi, L., Zhou, X., … Shen, W. (2016). Mit1 Transcription Factor Mediates Methanol Signaling and Regulates the Alcohol Oxidase 1 ( AOX1 ) Promoter in Pichia pastoris. Journal of Biological Chemistry, 291(12), 6245–6261. https://doi.org/10.1074/jbc.m115.692053
  
 
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<!-- Add more about the biology of this part here

Revision as of 08:24, 15 October 2019


Promoter for the Mit1 transcription factor in the P.pastoris GS115 strain

Promoter for the MIT1 gene in the P. pastoris GS115 strain. Upregulated by Prm1.

Usage and Biology

The MIT1 promoter is homogenous to the P. pastoris GS115 strain. It is upregulated by the Prm1 protein, a transcription factor homogenous to the P. pastoris GS115 strain.

Reference

Liang, S., Wang, B., Pan, L., Ye, Y., He, M., Han, S., … Lin, Y. (2012). Comprehensive structural annotation of Pichia pastoris transcriptome and the response to various carbon sources using deep paired-end RNA sequencing. BMC Genomics, 13(1). https://doi.org/10.1186/1471-2164-13-738

Shi, L., Wang, J., Wang, X., Zhang, Y., Song, Z., Cai, M., & Zhou, X. (2019). Transcriptome and metabolome analyses reveal global behaviour of a genetically engineered methanol-independent Pichia pastoris strain. Process Biochemistry, 76(August 2018), 46–54. https://doi.org/10.1016/j.procbio.2018.10.014

Wang, X., Wang, Q., Wang, J., Zhou, M., Shi, L., Zhou, X., … Shen, W. (2016). Mit1 Transcription Factor Mediates Methanol Signaling and Regulates the Alcohol Oxidase 1 ( AOX1 ) Promoter in Pichia pastoris. Journal of Biological Chemistry, 291(12), 6245–6261. https://doi.org/10.1074/jbc.m115.692053

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal SpeI site found at 793
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal SpeI site found at 793
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal SpeI site found at 793
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal SpeI site found at 793
  • 1000
    COMPATIBLE WITH RFC[1000]