Difference between revisions of "Part:BBa K2680071"

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__NOTOC__
 
__NOTOC__
 
<partinfo>BBa_K2680071 short</partinfo>
 
<partinfo>BBa_K2680071 short</partinfo>
 
 
 
 
Medium-weak 39C Temperature-Sensitive (ptplA) mScarlet-I pdt#3e
 
  
 
Components: J23107 TPL + ptlpA b0034m mScarlet-I pdt#3e
 
Components: J23107 TPL + ptlpA b0034m mScarlet-I pdt#3e
 
  
 
===Mechanics===
 
===Mechanics===

Revision as of 01:52, 18 October 2018


39C Temperature-Sensitive (ptplA) mScarlet-I pdt#3e

Components: J23107 TPL + ptlpA b0034m mScarlet-I pdt#3e

Mechanics

J23107, a medium-weak constitutive promoter, constitutively expresses TlpA39. Unlike the original TlpA, TlpA39 undergoes a conformational change at 39C and loses its ability to bind the downstream pTlpA. Therefore, TlpA39 halts its repression of promoter pTlpA at temperatures above 39C, inducing the expression of the rapidly-maturing mScarlet-I. The mScarlet-I in this circuit has a pdt degradation tag, allowing for degradation by the mf-Lon protease. Specifically, this circuit contains pdt#3e, a weak and slow degradation tag from part series K2333401-K2333406 or BBa_K2333406.


As an IFFL

In this circuit, heat activates a reporter, mScarlet-I. In a complete IFFL (incoherent feed forward loop), an input must activate both a reporter and its inhibitor. Therefore, this circuit requires mf-Lon (or a different inhibitor of mScarlet-I) to act as an IFFL.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 51
    Illegal NheI site found at 74
    Illegal NotI site found at 613
    Illegal NotI site found at 1920
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal XhoI site found at 898
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 1201
  • 1000
    COMPATIBLE WITH RFC[1000]