Difference between revisions of "Part:BBa K131000"
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__NOTOC__ | __NOTOC__ | ||
<partinfo>BBa_K131000 short</partinfo> | <partinfo>BBa_K131000 short</partinfo> | ||
| − | This part contains the ColE2 operon in its entirety. | + | This part contains the ColE2 operon in its entirety. |
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===Usage and Biology=== | ===Usage and Biology=== | ||
| + | A colicin is an antibiotic protein produced by some E coli strains that is active against other E coli not possessing the plasmid (which contains an immunity gene). Colicin E2 is a DNAse, which enters the cell through the BtuB receptor. | ||
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| + | This operon is under the control of the Qrr promoter from E coli. This promoter is activated by the SOS response to DNA damage, which can be initiated in the lab by the addition of some dilute antibiotics, such as mitomycin C. When active, the promoter allows expression of both the colicin itself (<bbpart>K131004</bbpart>) and the immunity gene (<bbpart>K131003</bbpart>). After the immunity gene there is a terminator, followed directly by the lysis gene (<bbpart>K131005</bbpart>). Because of this, the lysis gene is only expressed when RNA polymerase is able to traverse the terminator, leading to very, very low levels of production even when the Qrr promoter is fully active. This gene is responsible for lysing the cell once it has produced large quantities of colicin, allowing the colicin out. As a note, even though this system requires the cell to commit suicide, it is still relatively efficient because it can take as little as one of the released colicins to kill another cell. | ||
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Revision as of 01:54, 29 October 2008
ColE2 Operon
This part contains the ColE2 operon in its entirety.
Usage and Biology
A colicin is an antibiotic protein produced by some E coli strains that is active against other E coli not possessing the plasmid (which contains an immunity gene). Colicin E2 is a DNAse, which enters the cell through the BtuB receptor.
This operon is under the control of the Qrr promoter from E coli. This promoter is activated by the SOS response to DNA damage, which can be initiated in the lab by the addition of some dilute antibiotics, such as mitomycin C. When active, the promoter allows expression of both the colicin itself (K131004) and the immunity gene (K131003). After the immunity gene there is a terminator, followed directly by the lysis gene (K131005). Because of this, the lysis gene is only expressed when RNA polymerase is able to traverse the terminator, leading to very, very low levels of production even when the Qrr promoter is fully active. This gene is responsible for lysing the cell once it has produced large quantities of colicin, allowing the colicin out. As a note, even though this system requires the cell to commit suicide, it is still relatively efficient because it can take as little as one of the released colicins to kill another cell.
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21INCOMPATIBLE WITH RFC[21]Illegal BglII site found at 2228
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]