Difference between revisions of "User:Scmohr/Sample Protein Gray boxes"
(New page: =='''For Protein Coding Sequences - Enzyme Example:'''== ===<SPAN style= 'color:brown'>Box Heading:</span>=== '''INFORMATION LINKS FOR <SPAN style= 'color:blue'>[https://parts.igem.org...) |
(→Box Content:) |
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| Line 53: | Line 53: | ||
*'''Other: n/a''' | *'''Other: n/a''' | ||
| − | '''Structure (PDB_ID): [http://www.pdb.org/pdb/cgi/explore.cgi?pdbId=2NS7 2NS7]''' | + | '''Structure (PDB_ID): [http://www.pdb.org/pdb/cgi/explore.cgi?pdbId=2NS7 2NS7], [http://www.rcsb.org/pdb/explore.do?structureId=1DU7 1DU7]''' |
'''UniProt (Accession No.): <SPAN style= 'color:blue'>[http://www.uniprot.org/uniprot/Q6QR72 Q6QR72]''' </span> | '''UniProt (Accession No.): <SPAN style= 'color:blue'>[http://www.uniprot.org/uniprot/Q6QR72 Q6QR72]''' </span> | ||
'''Biological Origin: <SPAN style= 'color:blue'> [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=562 ''Escherichia coli'''''] </span> | '''Biological Origin: <SPAN style= 'color:blue'> [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=562 ''Escherichia coli'''''] </span> | ||
| + | |||
| + | '''DNA Recognition Sequence: T''CTATCA''T''TGATAG''G | ||
'''Literature references (PubMed IDs): | '''Literature references (PubMed IDs): | ||
| − | <SPAN style= 'color:blue'>[http://www.ncbi.nlm.nih.gov/pubmed/9092630?dopt=Abstract '''PM 9092630'''] </span> | + | <SPAN style= 'color:blue'>[http://www.ncbi.nlm.nih.gov/pubmed/9092630?dopt=Abstract '''PM 9092630'''][http://www.ncbi.nlm.nih.gov/pubmed/10700280?dopt=Abstract '''PM 10700280'''] </span> |
'''Designer: <SPAN style= 'color:blue'> June Rhee, Connie Tao, Ty Thomson, Louis Waldman'''</span> | '''Designer: <SPAN style= 'color:blue'> June Rhee, Connie Tao, Ty Thomson, Louis Waldman'''</span> | ||
<SPAN style= 'color:red'>Note:</span> The database links in this box refer to reference information that may not ''exactly'' correspond to a given part, since by definition the parts have been engineered. | <SPAN style= 'color:red'>Note:</span> The database links in this box refer to reference information that may not ''exactly'' correspond to a given part, since by definition the parts have been engineered. | ||
Revision as of 18:34, 21 July 2008
Contents
For Protein Coding Sequences - Enzyme Example:
Box Heading:
INFORMATION LINKS FOR BBa_J45014
Box Content:
NAME: [http://www.expasy.org/enzyme/2.3.1.84 Alcohol O-acetyltransferase 1]
Nickname: AAT 1 or ATF1
Source of original DNA sequence:
- GenBank [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=Nucleotide&dopt=GenBank&val=1420813 GI: 1420813]
- Other: n/a
Structure (PDB_ID): n/a
UniProt (Accession No.): [http://www.uniprot.org/uniprot/P40353 P40353]
Reaction (EC No.): [http://www.chem.qmul.ac.uk/iubmb/enzyme/EC2/3/1/84.html EC 2.3.1.84]
Biological Origin: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=4932&lvl=3&lin=f&keep=1&srchmode=1&unlock Saccharomyces cerevisiae]
Literature references (PubMed IDs): [http://www.ncbi.nlm.nih.gov/pubmed/8085822?dopt=Abstract PM 8085822,] [http://www.ncbi.nlm.nih.gov/pubmed/12937998?dopt=Abstract PM 12937998,] [http://www.ncbi.nlm.nih.gov/pubmed/17891501?dopt=Abstract PM 17891501]
Designer: [http://parts2.mit.edu/wiki/index.php/MIT_2006 Andre Green]
[DISCLAIMER]
Note: The database links in this box refer to reference information that may not exactly correspond to a given part, since by definition the parts have been engineered.
For Protein Coding Sequences - Repressors and Activators Example:
Box Heading:
INFORMATION LINKS FOR BBa_C0040
Box Content:
NAME: Tetracycline repressor from transposon Tn10
Nickname: tetR
Source of original DNA sequence:
- GenBank [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=Nucleotide&dopt=GenBank&val=42494906 GI: 42494906]
- Other: n/a
Structure (PDB_ID): [http://www.pdb.org/pdb/cgi/explore.cgi?pdbId=2NS7 2NS7], [http://www.rcsb.org/pdb/explore.do?structureId=1DU7 1DU7]
UniProt (Accession No.): [http://www.uniprot.org/uniprot/Q6QR72 Q6QR72]
Biological Origin: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=562 Escherichia coli]
DNA Recognition Sequence: TCTATCATTGATAGG
Literature references (PubMed IDs): [http://www.ncbi.nlm.nih.gov/pubmed/9092630?dopt=Abstract PM 9092630][http://www.ncbi.nlm.nih.gov/pubmed/10700280?dopt=Abstract PM 10700280]
Designer: June Rhee, Connie Tao, Ty Thomson, Louis Waldman
Note: The database links in this box refer to reference information that may not exactly correspond to a given part, since by definition the parts have been engineered.