Difference between revisions of "Part:BBa K2550000"
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<b>T7 promoter Toehold Ribosome Switch with LacZ expression</b> | <b>T7 promoter Toehold Ribosome Switch with LacZ expression</b> | ||
| − | T7 Toehold LacZ is a construct that was developed to be applied as a biosensor. The part BBa_I732005 was submitted by 2007 UTSC iGEM that singularly included the LacZ lactose operon encoding the Beta-galactosidase protein. In effort to build | + | T7 Toehold LacZ is a construct that was developed to be applied as a biosensor. The part BBa_I732005 was submitted by 2007 UTSC iGEM that singularly included the LacZ lactose operon encoding the Beta-galactosidase protein. In effort to build on this biobrick and implement LacZ blue color expression as a biosensor, Lambert iGEM obtained a LacZ toehold switch construct assembled with a T7 promoter from the Styczynski Lab at Georgia Institute of Technology. When assembled with a distinct RNA sequence complementary to the trigger sequence, the produced blue pigment expression can be characterized based on a Red, Green, Blue (RGB) scale. |
<b>Description</b> | <b>Description</b> | ||
| − | Toehold | + | Toehold switches are biosensors that can activate gene expression in response to a chosen RNA sequence that is comprised of a switch and a trigger. The switch includes a hairpin loop structure designed to be complementary to the trigger sequence along with a reporter protein downstream. The Ribosomal Binding Site (RBS) and starting sequence are concealed in the toehold switch, preventing the reporter from being expressed. When the trigger RNA sequence is present, it will bind to the complementary sequence in the toehold switch and unravel the hairpin loop allowing the reporter protein to be expressed. The toehold switch applied in the construct conceals the RBS and starting sequence that codes for the LacZ gene. When the trigger sequence is present |
| − | The lac operon is induced by lactose and IPTG (isopropyl β-D-1-thiogalactopyranoside); this region of the genome is responsible for transporting and metabolizing lactose. Within the lac operon, the gene, LacZ, codes for the B-galactosidase protein. When this protein is expressed, it breaks down X-gal (5-bromo-4-chloro-3-indolyl-β-D-galactoside) into galactose and an insoluble blue pigment. Therefore, when the gene is synthesized in the chassis, the colonies will appear blue. This mechanism was implemented in the toehold construct to identify the presence of specific substances. | + | The lac operon is induced by lactose and IPTG (isopropyl β-D-1-thiogalactopyranoside); this region of the genome is responsible for transporting and metabolizing lactose. Within the lac operon, the gene, LacZ, codes for the B-galactosidase protein. When this protein is expressed, it breaks down X-gal (5-bromo-4-chloro-3-indolyl-β-D-galactoside) into galactose and an insoluble blue pigment. Therefore, when the gene is synthesized in the chassis, the colonies will appear blue. This mechanism was implemented in the toehold switch construct to identify the presence of specific substances. |
Revision as of 15:02, 16 October 2018
T7 promoter Toehold Ribosome Switch with LacZ expression
T7 Toehold LacZ is a construct that was developed to be applied as a biosensor. The part BBa_I732005 was submitted by 2007 UTSC iGEM that singularly included the LacZ lactose operon encoding the Beta-galactosidase protein. In effort to build on this biobrick and implement LacZ blue color expression as a biosensor, Lambert iGEM obtained a LacZ toehold switch construct assembled with a T7 promoter from the Styczynski Lab at Georgia Institute of Technology. When assembled with a distinct RNA sequence complementary to the trigger sequence, the produced blue pigment expression can be characterized based on a Red, Green, Blue (RGB) scale.
Description
Toehold switches are biosensors that can activate gene expression in response to a chosen RNA sequence that is comprised of a switch and a trigger. The switch includes a hairpin loop structure designed to be complementary to the trigger sequence along with a reporter protein downstream. The Ribosomal Binding Site (RBS) and starting sequence are concealed in the toehold switch, preventing the reporter from being expressed. When the trigger RNA sequence is present, it will bind to the complementary sequence in the toehold switch and unravel the hairpin loop allowing the reporter protein to be expressed. The toehold switch applied in the construct conceals the RBS and starting sequence that codes for the LacZ gene. When the trigger sequence is present
The lac operon is induced by lactose and IPTG (isopropyl β-D-1-thiogalactopyranoside); this region of the genome is responsible for transporting and metabolizing lactose. Within the lac operon, the gene, LacZ, codes for the B-galactosidase protein. When this protein is expressed, it breaks down X-gal (5-bromo-4-chloro-3-indolyl-β-D-galactoside) into galactose and an insoluble blue pigment. Therefore, when the gene is synthesized in the chassis, the colonies will appear blue. This mechanism was implemented in the toehold switch construct to identify the presence of specific substances.