Difference between revisions of "Part:BBa K2629000:Experience"
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<h1> Test A: <I> Is this part able to detect the target for which it has been designed ?</I> </h1><br> | <h1> Test A: <I> Is this part able to detect the target for which it has been designed ?</I> </h1><br> | ||
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<p> Unfortunately, results were too heterogenous to bring any conclusions. Indeed, the number of colonies, for the 1:100 and 1:200 ratios, expected was not good enought (there is a possibility that the detector was badly digested and was consequently transformed). </p> | <p> Unfortunately, results were too heterogenous to bring any conclusions. Indeed, the number of colonies, for the 1:100 and 1:200 ratios, expected was not good enought (there is a possibility that the detector was badly digested and was consequently transformed). </p> | ||
Revision as of 14:15, 23 September 2018
Experiments were done on a plasmid in which the probe has been inserted, thanks the Gibson technic, in psB1C3-BBa_J04450.
Contents
Results of the clonning of the probe into psB1C3-BBa_J04450
Sequencage
Test A: Is this part able to detect the target for which it has been designed ?
Unfortunately, results were too heterogenous to bring any conclusions. Indeed, the number of colonies, for the 1:100 and 1:200 ratios, expected was not good enought (there is a possibility that the detector was badly digested and was consequently transformed).
Test B: Is this part able to detect specifically the target for which it has been designed ?
In order to evaluate the specificity of the detector part of BBa_K2629000, different “false target” sequences have been synthesized.
An algorithm was made by iGEM Grenoble Alpes 2017 to give random sequences, more or less homologous to the original target with 5%, 15%, 25% and 50% randomly modified pairs of nucleotides (length is kept 36bp).
The algorithm can be found here :
Unfortunately, we did not have the opportunity and the time to carry out these experiments.
User Reviews
UNIQ47f8f9f8a3720647-partinfo-00000000-QINU UNIQ47f8f9f8a3720647-partinfo-00000001-QINU